ASPA — 493 ClinVar variants

All ClinVar germline ASPA variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 130 flagged for review →

44 Pathogenic · 47 Pathogenic/Likely pathogenic · 89 Likely pathogenic · 13 Conflicting · 13 Benign · 2 Benign/Likely benign · 165 Likely benign · 120 Uncertain significance

Full ASPA gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions

⚑ Evidence disagreements 130

Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.

Predictors vs ClinVar 5

ClinVar calls these pathogenic, but the computational predictors lean tolerated — the highest-value review flag.

Predictors agree, ClinVar conflicts 5

ClinVar submitters conflict, but the independent predictors unanimously agree — a QC review flag, not a reclassification.

Predictors lean, ClinVar uncertain 53

ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification.

Predictors split 67

The independent predictors disagree with each other — read with care.

All ASPA variants

Pathogenic 44

Pathogenic/Likely pathogenic 47

  • c.237-2A>T Multiple submitters Canavan Disease, Familial Form
  • c.433-2A>G Multiple submitters Canavan Disease, Familial Form
  • c.634+1G>T Multiple submitters Canavan Disease, Familial Form
  • c.635-1G>C Multiple submitters Canavan disease
  • c.744+1G>A Multiple submitters Canavan disease
  • p.Ala287Thr Multiple submitters Canavan Disease, Familial Form
  • p.Ala296fs Multiple submitters Canavan disease
  • p.Ala57Thr Multiple submitters Canavan disease
  • p.Arg168Cys Multiple submitters Inborn genetic diseases ⚠
  • p.Arg168His Multiple submitters Canavan Disease, Familial Form ⚠
  • p.Arg71His Multiple submitters Canavan Disease, Familial Form
  • p.Asn54Lys Multiple submitters Canavan disease
  • p.Asp114Tyr Multiple submitters Canavan Disease, Familial Form
  • p.Asp204fs Multiple submitters Canavan disease
  • p.Asp204His Multiple submitters Canavan disease
  • p.Asp249Val Multiple submitters Canavan disease
  • p.Cys152Arg Multiple submitters Canavan Disease, Familial Form
  • p.Cys152fs Multiple submitters Canavan disease
  • p.Cys276fs Multiple submitters Canavan disease
  • p.Gln194Ter Multiple submitters Canavan disease
  • p.Glu285Ala Multiple submitters Canavan Disease, Familial Form
  • p.Glu290Ter Multiple submitters Canavan disease
  • p.Glu293fs Multiple submitters Canavan Disease, Familial Form
  • p.Glu293fs Multiple submitters Canavan disease
  • p.Glu95Ter Multiple submitters Canavan disease
  • p.Gly123Glu Multiple submitters Canavan Disease, Familial Form
  • p.Gly176Ser Multiple submitters mild Canavan disease
  • p.Gly274Arg Multiple submitters Canavan Disease, Familial Form ⚠
  • p.Gly27Arg Multiple submitters Canavan Disease, Familial Form
  • p.His116fs Multiple submitters Canavan disease
  • p.Ile11fs Multiple submitters Canavan Disease, Familial Form
  • p.Ile143Phe Multiple submitters Canavan Disease, Familial Form ⚠
  • p.Ile16Thr Multiple submitters Canavan disease
  • p.Met1Ile Multiple submitters Canavan disease
  • p.Met1Thr Multiple submitters Canavan disease
  • p.Phe295Ser Multiple submitters Canavan disease
  • p.Pro183His Multiple submitters Canavan disease
  • p.Pro280Ser Multiple submitters Canavan Disease, Familial Form
  • p.Pro50fs Multiple submitters Canavan disease
  • p.Ser108fs Multiple submitters Canavan Disease, Familial Form
  • p.Ser120fs Multiple submitters Inborn genetic diseases
  • p.Ser146fs Multiple submitters Canavan disease
  • p.Trp34Ter Multiple submitters Canavan disease
  • p.Tyr155Ter Multiple submitters Canavan disease
  • p.Val14fs Multiple submitters Canavan disease
  • p.Val179fs Multiple submitters Canavan disease
  • p.Val186Phe Multiple submitters Canavan disease

Likely pathogenic 89

Conflicting classifications of pathogenicity 13

Benign 13

Benign/Likely benign 2

  • p.Met82Thr Multiple submitters Inborn genetic diseases
  • p.Tyr231= Multiple submitters Inborn genetic diseases

Likely benign 165

Uncertain significance 120