CHD1 — 501 ClinVar variants

All ClinVar germline CHD1 variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 302 flagged for review →

5 Pathogenic · 7 Likely pathogenic · 14 Conflicting · 8 Benign · 4 Benign/Likely benign · 79 Likely benign · 384 Uncertain significance

Full CHD1 gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions

⚑ Evidence disagreements 302

Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.

Predictors lean, ClinVar uncertain 212

ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification. · showing the 150 best-reviewed of 212

Predictors split 82

The independent predictors disagree with each other — read with care.

All CHD1 variants

Pathogenic 5

  • p.Glu65Ter Single submitter developmental and epileptic encephalopathy
  • p.His1499fs Single submitter Pilarowski-Bjornsson syndrome
  • p.Pro1297fs Single submitter
  • p.Arg460Lys No assertion criteria Pilarowski-Bjornsson syndrome ⚠
  • p.Arg618Gln No assertion criteria Pilarowski-Bjornsson syndrome

Likely pathogenic 7

  • p.Gln378fs Single submitter
  • p.Glu1045Lys Single submitter Pilarowski-Bjornsson syndrome
  • p.Ile660Val Single submitter Pilarowski-Bjornsson syndrome ⚠
  • p.Pro368fs Single submitter Pilarowski-Bjornsson syndrome
  • p.Ser164fs Single submitter Pilarowski-Bjornsson syndrome
  • p.Ser215fs Single submitter Pilarowski-Bjornsson syndrome
  • p.Ser705fs Single submitter Pilarowski-Bjornsson syndrome

Conflicting classifications of pathogenicity 14

Benign 8

Benign/Likely benign 4

Likely benign 79

Uncertain significance 384

Showing the top 300 by review status; the full set is in the sitemap.