DHDDS — 591 ClinVar variants

All ClinVar germline DHDDS variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 224 flagged for review →

11 Pathogenic · 6 Pathogenic/Likely pathogenic · 22 Likely pathogenic · 18 Conflicting · 15 Benign · 242 Likely benign · 277 Uncertain significance

Full DHDDS gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions

⚑ Evidence disagreements 224

Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.

Predictors agree, ClinVar conflicts 4

ClinVar submitters conflict, but the independent predictors unanimously agree — a QC review flag, not a reclassification.

Predicted LoF vs a conflicting call 5

ClinVar submitters conflict, and it's a predicted loss-of-function change in a gene where LoF causes disease — flagged for review, not resolved (verify NMD-escape for C-terminal truncations). Non-missense.

Predictors lean, ClinVar uncertain 107

ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification.

Predictors split 108

The independent predictors disagree with each other — read with care.

All DHDDS variants

Pathogenic 11

  • p.Arg205Gln Multiple submitters retinitis pigmentosa 59
  • p.Arg211Gln Multiple submitters retinitis pigmentosa 59
  • p.Arg37Cys Multiple submitters retinitis pigmentosa 59
  • p.Arg37Ser Multiple submitters retinitis pigmentosa 59
  • p.Lys42Glu Multiple submitters developmental delay and seizures with or without movement abnormalities ⚠
  • p.Pro233Arg Multiple submitters retinitis pigmentosa 59
  • p.Asp34fs Single submitter retinitis pigmentosa 59
  • p.Pro128fs Single submitter retinitis pigmentosa 59
  • p.Trp12Ter Single submitter retinitis pigmentosa 59
  • p.Trp171fs Single submitter retinitis pigmentosa 59
  • p.Trp238Ter Single submitter retinitis pigmentosa 59

Pathogenic/Likely pathogenic 6

  • p.Arg37His Multiple submitters retinitis pigmentosa 59
  • p.Arg38His Multiple submitters Inborn genetic diseases
  • p.Gly35Glu Multiple submitters retinitis pigmentosa 59
  • p.Ser88fs Multiple submitters retinitis pigmentosa 59
  • p.Trp171Ter Multiple submitters retinitis pigmentosa 59
  • p.Val173fs Multiple submitters retinitis pigmentosa 59

Likely pathogenic 22

  • c.441-24A>G Multiple submitters retinitis pigmentosa 59
  • c.658-2A>G Multiple submitters retinitis pigmentosa 59
  • p.His222fs Multiple submitters retinitis pigmentosa 59
  • p.Thr206Ala Multiple submitters retinitis pigmentosa
  • c.324-1G>T Single submitter retinitis pigmentosa 59
  • c.441-2A>T Single submitter retinitis pigmentosa 59
  • c.650_657+54del Single submitter retinitis pigmentosa 59
  • c.657+1G>A Single submitter retinitis pigmentosa 59
  • p.Arg211Gly Single submitter Inborn genetic diseases
  • p.Arg309Ter Single submitter
  • p.Arg85Cys Single submitter developmental delay and seizures with or without movement abnormalities
  • p.Gln246Ter Single submitter inherited retinal dystrophy
  • p.Gln274Ter Single submitter retinitis pigmentosa 59
  • p.Gly54Glu Single submitter
  • p.Lys190Ter Single submitter retinitis pigmentosa 59
  • p.Lys42Ter Single submitter retinitis pigmentosa 59
  • p.Phe215fs Single submitter retinitis pigmentosa 59
  • p.Ser213Asn Single submitter DHDDS-related disorder
  • p.Thr276fs Single submitter retinitis pigmentosa 59
  • p.Trp232Ter Single submitter retinitis pigmentosa 59
  • p.Tyr235Ter Single submitter retinitis pigmentosa 59
  • p.Asp34Glu No assertion criteria retinitis pigmentosa 59

Conflicting classifications of pathogenicity 18

Benign 15

Likely benign 242

  • c.181-161A>G Multiple submitters
  • c.*629C>T Multiple submitters retinitis pigmentosa
  • c.180+13G>A Single submitter retinitis pigmentosa 59
  • c.180+15C>T Single submitter retinitis pigmentosa 59
  • c.180+18A>G Single submitter retinitis pigmentosa 59
  • c.180+19G>A Single submitter retinitis pigmentosa 59
  • c.180+6dup Single submitter retinitis pigmentosa 59
  • c.180+9G>A Single submitter retinitis pigmentosa 59
  • c.180+9G>T Single submitter retinitis pigmentosa 59
  • c.181-17G>A Single submitter retinitis pigmentosa 59
  • c.181-5C>T Single submitter retinitis pigmentosa 59
  • c.181-7C>G Single submitter retinitis pigmentosa 59
  • c.181-7C>T Single submitter retinitis pigmentosa 59
  • c.181-8C>T Single submitter retinitis pigmentosa 59
  • c.181-9C>T Single submitter retinitis pigmentosa 59
  • c.323+10T>C Single submitter retinitis pigmentosa 59
  • c.323+11A>C Single submitter retinitis pigmentosa 59
  • c.323+16A>T Single submitter retinitis pigmentosa 59
  • c.323+17G>A Single submitter retinitis pigmentosa 59
  • c.323+7T>G Single submitter retinitis pigmentosa 59
  • c.323+9C>G Single submitter retinitis pigmentosa 59
  • c.324-18C>T Single submitter retinitis pigmentosa 59
  • c.324-20T>C Single submitter retinitis pigmentosa 59
  • c.324-4T>G Single submitter retinitis pigmentosa 59
  • c.324-6G>C Single submitter retinitis pigmentosa 59
  • c.324-7T>C Single submitter retinitis pigmentosa 59
  • c.324-8C>T Single submitter retinitis pigmentosa 59
  • c.324-9C>A Single submitter retinitis pigmentosa 59
  • c.324-9C>T Single submitter retinitis pigmentosa 59
  • c.440+10C>T Single submitter retinitis pigmentosa 59
  • c.440+12_440+13del Single submitter retinitis pigmentosa 59
  • c.440+14T>G Single submitter retinitis pigmentosa 59
  • c.440+20T>C Single submitter retinitis pigmentosa 59
  • c.440+7T>A Single submitter retinitis pigmentosa 59
  • c.440+7T>G Single submitter retinitis pigmentosa 59
  • c.440+8C>A Single submitter retinitis pigmentosa 59
  • c.441-10C>T Single submitter retinitis pigmentosa 59
  • c.441-12_441-10del Single submitter retinitis pigmentosa 59
  • c.441-14T>G Single submitter retinitis pigmentosa 59
  • c.441-16_441-15del Single submitter retinitis pigmentosa 59
  • c.441-18C>A Single submitter retinitis pigmentosa 59
  • c.441-20T>G Single submitter retinitis pigmentosa 59
  • c.441-5C>T Single submitter retinitis pigmentosa 59
  • c.542+11T>G Single submitter retinitis pigmentosa 59
  • c.542+16T>C Single submitter retinitis pigmentosa 59
  • c.542+18G>A Single submitter retinitis pigmentosa 59
  • c.542+20A>G Single submitter retinitis pigmentosa 59
  • c.542+7C>A Single submitter retinitis pigmentosa 59
  • c.542+7C>T Single submitter retinitis pigmentosa 59
  • c.543-10C>G Single submitter retinitis pigmentosa 59
  • c.543-10C>T Single submitter retinitis pigmentosa 59
  • c.543-11G>C Single submitter retinitis pigmentosa 59
  • c.543-11G>T Single submitter retinitis pigmentosa 59
  • c.543-287T>C Single submitter
  • c.543-4236G>A Single submitter
  • c.543-5C>G Single submitter retinitis pigmentosa 59
  • c.543-7A>G Single submitter retinitis pigmentosa 59
  • c.543-86A>G Single submitter
  • c.543-8C>G Single submitter retinitis pigmentosa 59
  • c.543-9T>C Single submitter retinitis pigmentosa 59
  • c.63+11del Single submitter retinitis pigmentosa 59
  • c.63+13C>T Single submitter retinitis pigmentosa 59
  • c.63+18G>A Single submitter retinitis pigmentosa 59
  • c.63+19C>T Single submitter retinitis pigmentosa 59
  • c.63+8A>G Single submitter retinitis pigmentosa 59
  • c.63+9T>C Single submitter retinitis pigmentosa 59
  • c.64-11C>T Single submitter retinitis pigmentosa 59
  • c.64-12C>A Single submitter retinitis pigmentosa 59
  • c.64-12C>T Single submitter retinitis pigmentosa 59
  • c.64-19T>C Single submitter retinitis pigmentosa 59
  • c.64-19T>G Single submitter retinitis pigmentosa 59
  • c.64-20T>C Single submitter retinitis pigmentosa 59
  • c.64-6C>T Single submitter retinitis pigmentosa 59
  • c.64-7T>C Single submitter retinitis pigmentosa 59
  • c.64-9A>C Single submitter retinitis pigmentosa 59
  • c.657+11T>G Single submitter retinitis pigmentosa 59
  • c.657+17T>C Single submitter retinitis pigmentosa 59
  • c.657+8A>G Single submitter retinitis pigmentosa 59
  • c.658-11_658-9dup Single submitter retinitis pigmentosa 59
  • c.658-11A>C Single submitter retinitis pigmentosa 59
  • c.658-11A>G Single submitter retinitis pigmentosa 59
  • c.658-11A>T Single submitter retinitis pigmentosa 59
  • c.658-12T>C Single submitter retinitis pigmentosa 59
  • c.658-12T>G Single submitter retinitis pigmentosa 59
  • c.658-17C>T Single submitter retinitis pigmentosa 59
  • c.658-19T>C Single submitter retinitis pigmentosa 59
  • c.658-20C>G Single submitter retinitis pigmentosa 59
  • c.658-5C>G Single submitter retinitis pigmentosa 59
  • c.658-5C>T Single submitter retinitis pigmentosa 59
  • c.658-6T>A Single submitter
  • c.658-8T>C Single submitter retinitis pigmentosa 59
  • c.658-9C>T Single submitter retinitis pigmentosa 59
  • c.765+15A>G Single submitter retinitis pigmentosa 59
  • c.765+18G>T Single submitter retinitis pigmentosa 59
  • c.765+19C>T Single submitter retinitis pigmentosa 59
  • c.765+7A>G Single submitter retinitis pigmentosa 59
  • c.765+7A>T Single submitter retinitis pigmentosa 59
  • c.765+8A>G Single submitter retinitis pigmentosa 59
  • c.765+9G>C Single submitter retinitis pigmentosa 59
  • c.766-10T>C Single submitter retinitis pigmentosa 59
  • c.766-10T>G Single submitter retinitis pigmentosa 59
  • c.766-12T>A Single submitter retinitis pigmentosa 59
  • c.766-13T>A Single submitter retinitis pigmentosa 59
  • c.766-18C>T Single submitter retinitis pigmentosa 59
  • c.766-20T>C Single submitter retinitis pigmentosa 59
  • c.766-6dup Single submitter retinitis pigmentosa 59
  • c.766-7C>G Single submitter retinitis pigmentosa 59
  • c.766-8T>C Single submitter retinitis pigmentosa 59
  • c.-119G>A Single submitter retinitis pigmentosa
  • c.*623G>A Single submitter retinitis pigmentosa
  • p.Ala136= Single submitter retinitis pigmentosa 59
  • p.Ala141= Single submitter retinitis pigmentosa 59
  • p.Ala155= Single submitter retinitis pigmentosa 59
  • p.Ala17= Single submitter retinitis pigmentosa 59
  • p.Ala170= Single submitter retinitis pigmentosa 59
  • p.Ala288= Single submitter retinitis pigmentosa 59
  • p.Ala292= Single submitter retinitis pigmentosa 59
  • p.Ala304= Single submitter retinitis pigmentosa 59
  • p.Ala326= Single submitter retinitis pigmentosa 59
  • p.Ala40= Single submitter retinitis pigmentosa 59
  • p.Ala59= Single submitter retinitis pigmentosa 59
  • p.Ala77= Single submitter retinitis pigmentosa 59
  • p.Arg103= Single submitter retinitis pigmentosa 59
  • p.Arg119= Single submitter retinitis pigmentosa 59
  • p.Arg14= Single submitter retinitis pigmentosa 59
  • p.Arg167= Single submitter retinitis pigmentosa 59
  • p.Arg196= Single submitter retinitis pigmentosa 59
  • p.Arg205= Single submitter retinitis pigmentosa 59
  • p.Arg267= Single submitter retinitis pigmentosa 59
  • p.Arg272= Single submitter retinitis pigmentosa 59
  • p.Arg283= Single submitter retinitis pigmentosa 59
  • p.Arg296= Single submitter retinitis pigmentosa 59
  • p.Arg298= Single submitter retinitis pigmentosa 59
  • p.Arg305= Single submitter retinitis pigmentosa 59
  • p.Arg306= Single submitter retinitis pigmentosa 59
  • p.Arg37= Single submitter retinitis pigmentosa 59
  • p.Arg47= Single submitter retinitis pigmentosa 59
  • p.Arg63= Single submitter retinitis pigmentosa 59
  • p.Arg98= Single submitter retinitis pigmentosa 59
  • p.Asn146= Single submitter retinitis pigmentosa 59
  • p.Asn164= Single submitter retinitis pigmentosa 59
  • p.Asn250= Single submitter retinitis pigmentosa 59
  • p.Asn36= Single submitter retinitis pigmentosa 59
  • p.Asn56= Single submitter retinitis pigmentosa 59
  • p.Asp189= Single submitter retinitis pigmentosa 59
  • p.Asp201= Single submitter retinitis pigmentosa 59
  • p.Asp291= Single submitter retinitis pigmentosa 59
  • p.Asp34= Single submitter retinitis pigmentosa 59
  • p.Asp91= Single submitter retinitis pigmentosa 59
  • p.Cys148= Single submitter retinitis pigmentosa 59
  • p.Cys153= Single submitter retinitis pigmentosa 59
  • p.Gln112= Single submitter retinitis pigmentosa 59
  • p.Gln140= Single submitter retinitis pigmentosa 59
  • p.Gln228= Single submitter retinitis pigmentosa 59
  • p.Gln246= Single submitter retinitis pigmentosa 59
  • p.Gln293= Single submitter retinitis pigmentosa 59
  • p.Gln311= Single submitter retinitis pigmentosa 59
  • p.Gln44= Single submitter
  • p.Gln48= Single submitter retinitis pigmentosa 59
  • p.Glu168= Single submitter retinitis pigmentosa 59
  • p.Glu234= Single submitter retinitis pigmentosa 59
  • p.Glu263= Single submitter retinitis pigmentosa 59
  • p.Glu271= Single submitter retinitis pigmentosa 59
  • p.Glu279= Single submitter retinitis pigmentosa 59
  • p.Glu307= Single submitter retinitis pigmentosa 59
  • p.Glu46= Single submitter retinitis pigmentosa 59
  • p.Gly115= Single submitter retinitis pigmentosa 59
  • p.Gly172= Single submitter retinitis pigmentosa 59
  • p.Gly285= Single submitter retinitis pigmentosa 59
  • p.Gly329= Single submitter retinitis pigmentosa 59
  • p.Gly69= Single submitter retinitis pigmentosa 59
  • p.His160= Single submitter retinitis pigmentosa 59
  • p.His251= Single submitter retinitis pigmentosa 59
  • p.His51= Single submitter retinitis pigmentosa 59
  • p.Ile162= Single submitter retinitis pigmentosa 59
  • p.Ile183= Single submitter retinitis pigmentosa 59
  • p.Ile19= Single submitter retinitis pigmentosa 59
  • p.Ile244= Single submitter retinitis pigmentosa 59
  • p.Ile4= Single submitter retinitis pigmentosa 59
  • p.Ile70= Single submitter retinitis pigmentosa 59
  • p.Leu104= Single submitter retinitis pigmentosa 59
  • p.Leu11= Single submitter retinitis pigmentosa 59
  • p.Leu121= Single submitter retinitis pigmentosa 59
  • p.Leu124= Single submitter retinitis pigmentosa 59
  • p.Leu129= Single submitter retinitis pigmentosa 59
  • p.Leu150= Single submitter retinitis pigmentosa 59
  • p.Leu177= Single submitter retinitis pigmentosa 59
  • p.Leu178= Single submitter retinitis pigmentosa 59
  • p.Leu187= Single submitter retinitis pigmentosa 59
  • p.Leu192= Single submitter retinitis pigmentosa 59
  • p.Leu216= Single submitter retinitis pigmentosa 59
  • p.Leu217= Single submitter retinitis pigmentosa 59
  • p.Leu231= Single submitter retinitis pigmentosa 59
  • p.Leu240= Single submitter retinitis pigmentosa 59
  • p.Leu245= Single submitter retinitis pigmentosa 59
  • p.Leu270= Single submitter retinitis pigmentosa 59
  • p.Leu281= Single submitter retinitis pigmentosa 59
  • p.Leu282= Single submitter retinitis pigmentosa 59
  • p.Leu314= Single submitter retinitis pigmentosa 59
  • p.Leu317= Single submitter retinitis pigmentosa 59
  • p.Leu319= Single submitter retinitis pigmentosa 59
  • p.Leu325= Single submitter retinitis pigmentosa 59
  • p.Leu62= Single submitter retinitis pigmentosa 59
  • p.Leu66= Single submitter retinitis pigmentosa 59
  • p.Leu68= Single submitter retinitis pigmentosa 59
  • p.Leu71= Single submitter retinitis pigmentosa 59
  • p.Lys143= Single submitter retinitis pigmentosa 59
  • p.Lys190= Single submitter retinitis pigmentosa 59
  • p.Lys27= Single submitter retinitis pigmentosa 59
  • p.Lys42= Single submitter retinitis pigmentosa 59
  • p.Lys57= Single submitter retinitis pigmentosa 59
  • p.Lys87= Single submitter retinitis pigmentosa 59
  • p.Phe149= Single submitter retinitis pigmentosa 59
  • p.Phe15= Single submitter retinitis pigmentosa 59
  • p.Phe237= Single submitter retinitis pigmentosa 59
  • p.Phe241= Single submitter retinitis pigmentosa 59
  • p.Phe31= Single submitter retinitis pigmentosa 59
  • p.Phe313= Single submitter retinitis pigmentosa 59
  • p.Pro128= Single submitter retinitis pigmentosa 59
  • p.Pro200= Single submitter retinitis pigmentosa 59
  • p.Pro229= Single submitter retinitis pigmentosa 59
  • p.Pro233= Single submitter retinitis pigmentosa 59
  • p.Pro26= Single submitter retinitis pigmentosa 59
  • p.Ser2= Single submitter retinitis pigmentosa 59
  • p.Ser207= Single submitter retinitis pigmentosa 59
  • p.Ser252= Single submitter retinitis pigmentosa 59
  • p.Ser303= Single submitter retinitis pigmentosa 59
  • p.Ser88= Single submitter retinitis pigmentosa 59
  • p.Thr142= Single submitter retinitis pigmentosa 59
  • p.Thr220= Single submitter retinitis pigmentosa 59
  • p.Thr61= Single submitter
  • p.Tyr145= Single submitter retinitis pigmentosa 59
  • p.Tyr235= Single submitter retinitis pigmentosa 59
  • p.Tyr261= Single submitter retinitis pigmentosa 59
  • p.Tyr39= Single submitter retinitis pigmentosa 59
  • p.Tyr76= Single submitter retinitis pigmentosa 59
  • p.Val116= Single submitter retinitis pigmentosa 59
  • p.Val166= Single submitter retinitis pigmentosa 59
  • p.Val173= Single submitter retinitis pigmentosa 59
  • p.Val45= Single submitter retinitis pigmentosa 59
  • p.Val73= Single submitter retinitis pigmentosa 59
  • p.Val90= Single submitter retinitis pigmentosa 59

Uncertain significance 277