DNASE2 — 189 ClinVar variants
All ClinVar germline DNASE2 variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 82 flagged for review →
3 Pathogenic · 4 Conflicting · 7 Benign · 2 Benign/Likely benign · 83 Likely benign · 90 Uncertain significance
Full DNASE2 gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions⚑ Evidence disagreements 82
Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.
Predictors agree, ClinVar conflicts 3
ClinVar submitters conflict, but the independent predictors unanimously agree — a QC review flag, not a reclassification.
Predictors lean, ClinVar uncertain 40
ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification.
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DNASE2 p.Ala332Asp
Uncertain significance
Multiple submitters
autoinflammatory-pancytopenia syndrome due to DNASE2 deficiency
- DNASE2 p.Cys159Trp Uncertain significance Multiple submitters
- DNASE2 p.Glu43Gly Uncertain significance Multiple submitters
- DNASE2 p.Gly241Ser Uncertain significance Multiple submitters
- DNASE2 p.Gly286Ser Uncertain significance Multiple submitters
- DNASE2 p.Ile189Phe Uncertain significance Multiple submitters
- DNASE2 p.Leu274Arg Uncertain significance Multiple submitters
-
DNASE2 p.Met110Ile
Uncertain significance
Multiple submitters
DNASE2-related disorder
- DNASE2 p.Ser41Ala Uncertain significance Multiple submitters
- DNASE2 p.Ala150Thr Uncertain significance Single submitter
- DNASE2 p.Ala165Thr Uncertain significance Single submitter
- DNASE2 p.Arg314Trp Uncertain significance Single submitter
- DNASE2 p.Asn134His Uncertain significance Single submitter
- DNASE2 p.Asn277Ser Uncertain significance Single submitter
- DNASE2 p.Asn69Ser Uncertain significance Single submitter
- DNASE2 p.Asn96Lys Uncertain significance Single submitter
- DNASE2 p.Asp294His Uncertain significance Single submitter
- DNASE2 p.Cys159Ser Uncertain significance Single submitter
- DNASE2 p.Cys267Ser Uncertain significance Single submitter
- DNASE2 p.Cys347Tyr Uncertain significance Single submitter
- DNASE2 p.Gln320Lys Uncertain significance Single submitter
- DNASE2 p.Glu209Gly Uncertain significance Single submitter
- DNASE2 p.Glu43Gln Uncertain significance Single submitter
- DNASE2 p.Glu56Asp Uncertain significance Single submitter
- DNASE2 p.Ile270Val Uncertain significance Single submitter
- DNASE2 p.Lys34Asn Uncertain significance Single submitter
- DNASE2 p.Met110Arg Uncertain significance Single submitter
- DNASE2 p.Met350Ile Uncertain significance Single submitter
- DNASE2 p.Phe135Leu Uncertain significance Single submitter
- DNASE2 p.Pro13Thr Uncertain significance Single submitter
- DNASE2 p.Pro302Leu Uncertain significance Single submitter
- DNASE2 p.Pro354Ala Uncertain significance Single submitter
- DNASE2 p.Pro36Ser Uncertain significance Single submitter
- DNASE2 p.Ser207Arg Uncertain significance Single submitter
- DNASE2 p.Ser85Asn Uncertain significance Single submitter
- DNASE2 p.Trp298Leu Uncertain significance Single submitter
-
DNASE2 p.Tyr53His
Uncertain significance
Single submitter
autoinflammatory-pancytopenia syndrome due to DNASE2 deficiency
- DNASE2 p.Val181Ala Uncertain significance Single submitter
- DNASE2 p.Val75Leu Uncertain significance Single submitter
-
DNASE2 p.Gly322Asp
Uncertain significance
No assertion criteria
systemic lupus erythematosus
Predictors split 39
The independent predictors disagree with each other — read with care.
- DNASE2 p.Arg321Trp Uncertain significance Multiple submitters
- DNASE2 p.Met170Thr Uncertain significance Multiple submitters
- DNASE2 p.Pro163Ser Uncertain significance Multiple submitters
- DNASE2 p.Pro339Leu Uncertain significance Multiple submitters
- DNASE2 p.Thr218Ile Uncertain significance Multiple submitters
- DNASE2 p.Val341Leu Uncertain significance Multiple submitters
- DNASE2 p.Ala142Val Uncertain significance Single submitter
- DNASE2 p.Ala16Asp Uncertain significance Single submitter
- DNASE2 p.Arg314Gln Uncertain significance Single submitter
- DNASE2 p.Arg321Gln Uncertain significance Single submitter
- DNASE2 p.Arg77Gln Uncertain significance Single submitter
- DNASE2 p.Arg84Trp Uncertain significance Single submitter
- DNASE2 p.Asn212Lys Uncertain significance Single submitter
- DNASE2 p.Asn96Ser Uncertain significance Single submitter
-
DNASE2 p.Gln155Glu
Uncertain significance
Single submitter
DNASE2-related disorder
- DNASE2 p.Gln192Pro Uncertain significance Single submitter
- DNASE2 p.Gly222Arg Uncertain significance Single submitter
-
DNASE2 p.Gly24Glu
Uncertain significance
Single submitter
DNASE2-related disorder
- DNASE2 p.Gly304Glu Uncertain significance Single submitter
- DNASE2 p.Gly73Arg Uncertain significance Single submitter
- DNASE2 p.Ile279Met Uncertain significance Single submitter
- DNASE2 p.Leu247Arg Uncertain significance Single submitter
- DNASE2 p.Leu4Pro Uncertain significance Single submitter
- DNASE2 p.Leu94Phe Uncertain significance Single submitter
- DNASE2 p.Lys52Asn Uncertain significance Single submitter
- DNASE2 p.Phe126Tyr Uncertain significance Single submitter
- DNASE2 p.Pro100Ser Uncertain significance Single submitter
- DNASE2 p.Pro138Leu Conflicting Single submitter
- DNASE2 p.Pro339Gln Uncertain significance Single submitter
- DNASE2 p.Ser103Arg Uncertain significance Single submitter
- DNASE2 p.Ser141Pro Uncertain significance Single submitter
- DNASE2 p.Ser168Leu Uncertain significance Single submitter
- DNASE2 p.Ser168Trp Uncertain significance Single submitter
- DNASE2 p.Ser41Tyr Uncertain significance Single submitter
- DNASE2 p.Thr216Ile Uncertain significance Single submitter
- DNASE2 p.Tyr178Cys Uncertain significance Single submitter
- DNASE2 p.Val300Met Uncertain significance Single submitter
- DNASE2 p.Val309Leu Uncertain significance Single submitter
- DNASE2 p.Val309Met Uncertain significance Single submitter
All DNASE2 variants
Pathogenic 3
- p.Asp121Val No assertion criteria autoinflammatory-pancytopenia syndrome due to DNASE2 deficiency
- p.Gly116Ala No assertion criteria autoinflammatory-pancytopenia syndrome due to DNASE2 deficiency
- p.Tyr95Cys No assertion criteria autoinflammatory-pancytopenia syndrome due to DNASE2 deficiency
Conflicting classifications of pathogenicity 4
- p.Ile360Ser Single submitter DNASE2-related disorder ⚠
- p.Met170Ile Single submitter ⚠
- p.Pro138Leu Single submitter ⚠
- p.Val201Ile Single submitter ⚠
Benign 7
- p.His204Arg Multiple submitters
- p.Phe281= Multiple submitters
- p.Ser145= Multiple submitters
- c.267+14C>A Single submitter
- c.86+19del Single submitter
- c.86+19dup Single submitter
- p.Val206Ile Single submitter
Benign/Likely benign 2
- p.Ala45Gly Multiple submitters
- p.Pro71Ser Multiple submitters
Likely benign 83
- c.512-15C>T Multiple submitters
- p.Ala336= Multiple submitters
- p.Pro210= Multiple submitters
- p.Pro339= Multiple submitters
- p.Ser168= Multiple submitters
- c.267+18C>T Single submitter
- c.268-17C>G Single submitter
- c.268-5C>T Single submitter
- c.268-9C>T Single submitter
- c.346+13T>C Single submitter
- c.346+16G>A Single submitter
- c.346+20C>T Single submitter
- c.346+8C>T Single submitter
- c.347-15C>T Single submitter
- c.347-6G>C Single submitter
- c.511+15G>A Single submitter
- c.511+16G>A Single submitter
- c.511+7C>T Single submitter
- c.511+8G>A Single submitter
- c.512-11T>G Single submitter
- c.512-12C>T Single submitter
- c.512-6del Single submitter
- c.709+19G>T Single submitter
- c.709+20G>C Single submitter
- c.709+9C>T Single submitter
- c.710-12C>A Single submitter
- c.710-19C>T Single submitter
- c.86+15G>A Single submitter
- c.86+15G>C Single submitter
- c.86+19G>A Single submitter
- c.86+20C>G Single submitter
- c.86+8C>A Single submitter
- c.86+9G>C Single submitter
- c.86+9G>T Single submitter
- c.87-20G>A Single submitter
- p.Ala139= Single submitter
- p.Ala150= Single submitter
- p.Ala221= Single submitter
- p.Ala285= Single submitter
- p.Ala332= Single submitter
- p.Ala351= Single submitter
- p.Ala37= Single submitter
- p.Arg47= Single submitter
- p.Asn315= Single submitter
- p.Asp63= Single submitter
- p.Cys299= Single submitter
- p.Cys308= Single submitter
- p.Glu293= Single submitter
- p.Glu56= Single submitter
- p.Gly304= Single submitter
- p.Gly59= Single submitter
- p.His122= Single submitter
- p.His205= Single submitter
- p.Ile262= Single submitter
- p.Leu10= Single submitter
- p.Leu238= Single submitter
- p.Leu340= Single submitter
- p.Leu4= Single submitter
- p.Leu5= Single submitter
- p.Leu67= Single submitter
- p.Leu79= Single submitter
- p.Lys258= Single submitter
- p.Phe164= Single submitter
- p.Pro195= Single submitter
- p.Pro81= Single submitter
- p.Pro99= Single submitter
- p.Ser108= Single submitter
- p.Ser131= Single submitter
- p.Ser240= Single submitter
- p.Ser268= Single submitter
- p.Ser291= Single submitter
- p.Ser58= Single submitter
- p.Ser88= Single submitter
- p.Thr114= Single submitter
- p.Thr152= Single submitter
- p.Thr175= Single submitter
- p.Thr259= Single submitter
- p.Thr292= Single submitter
- p.Tyr153= Single submitter
- p.Tyr51= Single submitter
- p.Val200= Single submitter
- p.Val224= Single submitter
- p.Val300= Single submitter
Uncertain significance 90
- c.709+4A>T Multiple submitters DNASE2-related disorder
- p.Ala332Asp Multiple submitters autoinflammatory-pancytopenia syndrome due to DNASE2 deficiency ⚠
- p.Arg321Trp Multiple submitters ⚠
- p.Cys159Trp Multiple submitters ⚠
- p.Glu43Gly Multiple submitters ⚠
- p.Gly241Ser Multiple submitters ⚠
- p.Gly286Ser Multiple submitters ⚠
- p.Ile189Phe Multiple submitters ⚠
- p.Leu274Arg Multiple submitters ⚠
- p.Met110Ile Multiple submitters DNASE2-related disorder ⚠
- p.Met170Thr Multiple submitters ⚠
- p.Pro163Ser Multiple submitters ⚠
- p.Pro339Leu Multiple submitters ⚠
- p.Ser41Ala Multiple submitters ⚠
- p.Thr218Ile Multiple submitters ⚠
- p.Val341Leu Multiple submitters ⚠
- c.511+5G>A Single submitter
- c.86+2T>C Single submitter
- p.Ala142Val Single submitter ⚠
- p.Ala150Thr Single submitter ⚠
- p.Ala165Thr Single submitter ⚠
- p.Ala16Asp Single submitter ⚠
- p.Ala229Leu Single submitter
- p.Arg314Gln Single submitter ⚠
- p.Arg314Trp Single submitter ⚠
- p.Arg321Gln Single submitter ⚠
- p.Arg77Gln Single submitter ⚠
- p.Arg84Trp Single submitter ⚠
- p.Asn134His Single submitter ⚠
- p.Asn212Lys Single submitter ⚠
- p.Asn277Ser Single submitter ⚠
- p.Asn69Ser Single submitter ⚠
- p.Asn96Lys Single submitter ⚠
- p.Asn96Ser Single submitter ⚠
- p.Asp294His Single submitter ⚠
- p.Cys159Ser Single submitter ⚠
- p.Cys267Ser Single submitter ⚠
- p.Cys347Tyr Single submitter ⚠
- p.Gln155Glu Single submitter DNASE2-related disorder ⚠
- p.Gln192Pro Single submitter ⚠
- p.Gln320Lys Single submitter ⚠
- p.Glu209Gly Single submitter ⚠
- p.Glu209Ter Single submitter
- p.Glu43Gln Single submitter ⚠
- p.Glu56Asp Single submitter ⚠
- p.Gly222Arg Single submitter ⚠
- p.Gly24Glu Single submitter DNASE2-related disorder ⚠
- p.Gly304Glu Single submitter ⚠
- p.Gly73Arg Single submitter ⚠
- p.Ile270Val Single submitter ⚠
- p.Ile279Met Single submitter ⚠
- p.Leu247Arg Single submitter ⚠
- p.Leu4Pro Single submitter ⚠
- p.Leu94Phe Single submitter ⚠
- p.Lys34Asn Single submitter ⚠
- p.Lys52Asn Single submitter ⚠
- p.Met110Arg Single submitter ⚠
- p.Met350Ile Single submitter ⚠
- p.Phe126Tyr Single submitter ⚠
- p.Phe135Leu Single submitter ⚠
- p.Pro100Ser Single submitter ⚠
- p.Pro138= Single submitter
- p.Pro13Thr Single submitter ⚠
- p.Pro302Leu Single submitter ⚠
- p.Pro339Gln Single submitter ⚠
- p.Pro354Ala Single submitter ⚠
- p.Pro36Ser Single submitter ⚠
- p.Ser103Arg Single submitter ⚠
- p.Ser141Pro Single submitter ⚠
- p.Ser145Ile Single submitter
- p.Ser168Leu Single submitter ⚠
- p.Ser168Trp Single submitter ⚠
- p.Ser207Arg Single submitter ⚠
- p.Ser41Tyr Single submitter ⚠
- p.Ser58del Single submitter
- p.Ser85Asn Single submitter ⚠
- p.Thr216Ile Single submitter ⚠
- p.Trp271Ter Single submitter
- p.Trp298Leu Single submitter ⚠
- p.Trp61Ter Single submitter
- p.Tyr178Cys Single submitter ⚠
- p.Tyr184Ter Single submitter
- p.Tyr53His Single submitter autoinflammatory-pancytopenia syndrome due to DNASE2 deficiency ⚠
- p.Val129fs Single submitter
- p.Val181Ala Single submitter ⚠
- p.Val300Met Single submitter ⚠
- p.Val309Leu Single submitter ⚠
- p.Val309Met Single submitter ⚠
- p.Val75Leu Single submitter ⚠
- p.Gly322Asp No assertion criteria systemic lupus erythematosus ⚠