GSN — 951 ClinVar variants

All ClinVar germline GSN variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 420 flagged for review →

3 Pathogenic · 2 Pathogenic/Likely pathogenic · 1 Likely pathogenic · 58 Conflicting · 49 Benign · 38 Benign/Likely benign · 294 Likely benign · 506 Uncertain significance

Full GSN gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions

⚑ Evidence disagreements 420

Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.

Predictors agree, ClinVar conflicts 30

ClinVar submitters conflict, but the independent predictors unanimously agree — a QC review flag, not a reclassification.

Predictors lean, ClinVar uncertain 292

ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification. · showing the 150 best-reviewed of 292

Predictors split 98

The independent predictors disagree with each other — read with care.

All GSN variants

Pathogenic 3

  • p.Asn160Lys Multiple submitters Finnish type amyloidosis
  • p.Tyr250Cys No assertion criteria Finnish type amyloidosis
  • p.Tyr423His No assertion criteria Finnish type amyloidosis

Pathogenic/Likely pathogenic 2

  • p.Asp163Asn Multiple submitters GSN-related disorders
  • p.Asp163Tyr Multiple submitters Finnish type amyloidosis

Likely pathogenic 1

Conflicting classifications of pathogenicity 58

Benign 49

Benign/Likely benign 38

  • c.1191+14G>A Multiple submitters Finnish type amyloidosis
  • c.1416+16C>T Multiple submitters Finnish type amyloidosis
  • c.1762+20del Multiple submitters Finnish type amyloidosis
  • c.1887+11G>T Multiple submitters Finnish type amyloidosis
  • c.196+7C>T Multiple submitters Finnish type amyloidosis
  • c.197-4G>A Multiple submitters Inborn genetic diseases
  • c.2026+23del Multiple submitters
  • c.513+19T>C Multiple submitters Finnish type amyloidosis
  • c.664-4A>G Multiple submitters Finnish type amyloidosis
  • c.886+19G>T Multiple submitters Finnish type amyloidosis
  • c.-9-1967C>T Multiple submitters Finnish type amyloidosis
  • c.-9-2084C>G Multiple submitters
  • p.Ala43Ser Multiple submitters Inborn genetic diseases
  • p.Ala576Gly Multiple submitters Inborn genetic diseases
  • p.Ala76Val Multiple submitters ⚠
  • p.Arg430Cys Multiple submitters Inborn genetic diseases
  • p.Arg617Leu Multiple submitters Finnish type amyloidosis
  • p.Asn199= Multiple submitters Finnish type amyloidosis
  • p.Asp390= Multiple submitters Inborn genetic diseases
  • p.Gly505Arg Multiple submitters Inborn genetic diseases
  • p.His62= Multiple submitters Finnish type amyloidosis
  • p.Ile495= Multiple submitters Finnish type amyloidosis
  • p.Ile625Thr Multiple submitters Inborn genetic diseases
  • p.Leu337= Multiple submitters Finnish type amyloidosis
  • p.Leu594= Multiple submitters Inborn genetic diseases
  • p.Lys546Arg Multiple submitters Finnish type amyloidosis
  • p.Phe25Leu Multiple submitters ⚠
  • p.Ser521= Multiple submitters Inborn genetic diseases
  • p.Ser560= Multiple submitters Finnish type amyloidosis
  • p.Thr413= Multiple submitters Inborn genetic diseases
  • p.Thr644= Multiple submitters Finnish type amyloidosis
  • p.Thr644Met Multiple submitters Inborn genetic diseases
  • p.Thr682= Multiple submitters Inborn genetic diseases
  • p.Tyr496Cys Multiple submitters Inborn genetic diseases
  • p.Val128Met Multiple submitters Finnish type amyloidosis
  • p.Val366= Multiple submitters Finnish type amyloidosis
  • p.Val409Met Multiple submitters Finnish type amyloidosis
  • p.Val555Met Multiple submitters Finnish type amyloidosis

Likely benign 294

Uncertain significance 506

Showing the top 300 by review status; the full set is in the sitemap.