PDLIM3 — 469 ClinVar variants

All ClinVar germline PDLIM3 variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 227 flagged for review →

15 Conflicting · 38 Benign · 14 Benign/Likely benign · 135 Likely benign · 267 Uncertain significance

Full PDLIM3 gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions

⚑ Evidence disagreements 227

Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.

Predictors agree, ClinVar conflicts 7

ClinVar submitters conflict, but the independent predictors unanimously agree — a QC review flag, not a reclassification.

Predictors lean, ClinVar uncertain 174

ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification. · showing the 150 best-reviewed of 174

Predictors split 46

The independent predictors disagree with each other — read with care.

All PDLIM3 variants

Conflicting classifications of pathogenicity 15

Benign 38

Benign/Likely benign 14

  • c.246-9_246-5del Multiple submitters dilated cardiomyopathy
  • c.-9G>T Multiple submitters
  • p.Ala38= Multiple submitters dilated cardiomyopathy
  • p.Asp232= Multiple submitters dilated cardiomyopathy
  • p.Gly14= Multiple submitters hypertrophic cardiomyopathy
  • p.Gly20= Multiple submitters hypertrophic cardiomyopathy
  • p.Gly283= Multiple submitters hypertrophic cardiomyopathy
  • p.Gly331= Multiple submitters dilated cardiomyopathy
  • p.Gly54= Multiple submitters hypertrophic cardiomyopathy
  • p.Pro277= Multiple submitters hypertrophic cardiomyopathy
  • p.Pro351= Multiple submitters dilated cardiomyopathy
  • p.Ser139= Multiple submitters hypertrophic cardiomyopathy
  • p.Ser226= Multiple submitters hypertrophic cardiomyopathy
  • p.Thr245Ile Multiple submitters Cardiovascular phenotype

Likely benign 135

Uncertain significance 267