PRODH — 467 ClinVar variants

All ClinVar germline PRODH variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more.

10 Pathogenic · 2 Pathogenic/Likely pathogenic · 7 Likely pathogenic · 23 Conflicting · 66 Benign · 23 Benign/Likely benign · 144 Likely benign · 192 Uncertain significance

Full PRODH gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions

All PRODH variants

Pathogenic 10

  • p.Tyr412Ter Multiple submitters Inborn genetic diseases
  • p.Cys13fs Single submitter hyperprolinemia type 1
  • p.Gln127Ter Single submitter hyperprolinemia type 1
  • p.Leu108fs Single submitter hyperprolinemia type 1
  • p.Leu79Ter Single submitter hyperprolinemia type 1
  • p.Lys176fs Single submitter hyperprolinemia type 1
  • p.Ser323fs Single submitter hyperprolinemia type 1
  • p.Tyr181Ter Single submitter hyperprolinemia type 1
  • p.Val365fs Single submitter hyperprolinemia type 1
  • p.Arg521Gly No assertion criteria hyperprolinemia type 1

Pathogenic/Likely pathogenic 2

  • p.Gln59Ter Multiple submitters hyperprolinemia type 1
  • p.Glu153fs Multiple submitters PRODH-related disorders

Likely pathogenic 7

  • c.1104+2T>C Multiple submitters schizophrenia 4
  • c.1251+2C>T Single submitter hyperprolinemia type 1
  • c.1252-1G>A Single submitter hyperprolinemia type 1
  • p.Leu393fs Single submitter hyperprolinemia type 1
  • p.Met1Arg Single submitter hyperprolinemia type 1
  • p.Met1Leu Single submitter hyperprolinemia type 1
  • p.Val50fs Single submitter hyperprolinemia type 1

Conflicting classifications of pathogenicity 23

Benign 66

Benign/Likely benign 23

  • c.1104+16C>T Multiple submitters schizophrenia 4
  • c.1105-14C>T Multiple submitters hyperprolinemia type 1
  • c.1252-14C>T Multiple submitters hyperprolinemia type 1
  • c.517+19C>T Multiple submitters schizophrenia 4
  • c.733-5del Multiple submitters hyperprolinemia type 1
  • c.930-15C>T Multiple submitters schizophrenia 4
  • p.Ala454= Multiple submitters hyperprolinemia type 1
  • p.Ala472Thr Multiple submitters hyperprolinemia type 1
  • p.Ala58Thr Multiple submitters Inborn genetic diseases
  • p.Arg5His Multiple submitters hyperprolinemia type 1
  • p.Asn422Ser Multiple submitters hyperprolinemia type 1
  • p.Asp274= Multiple submitters schizophrenia 4
  • p.Asp426= Multiple submitters hyperprolinemia type 1
  • p.His520= Multiple submitters hyperprolinemia type 1
  • p.Ile390= Multiple submitters schizophrenia 4
  • p.Pro19Gln Multiple submitters hyperprolinemia type 1
  • p.Pro30Ser Multiple submitters Inborn genetic diseases
  • p.Pro8Leu Multiple submitters hyperprolinemia type 1
  • p.Thr275Asn Multiple submitters Inborn genetic diseases
  • p.Thr466= Multiple submitters hyperprolinemia type 1
  • p.Trp185Ter Multiple submitters Inborn genetic diseases
  • p.Tyr467= Multiple submitters hyperprolinemia type 1
  • p.Val427Met Multiple submitters hyperprolinemia type 1

Likely benign 144

Uncertain significance 192