TEX11 — 127 ClinVar variants
All ClinVar germline TEX11 variants across every classification, each assembled from ClinVar, gnomAD, AlphaMissense, conservation and more. 69 flagged for review →
16 Pathogenic · 1 Likely pathogenic · 5 Conflicting · 7 Benign · 2 Benign/Likely benign · 31 Likely benign · 65 Uncertain significance
Full TEX11 gene report on Sugi Atlas → Gene function, pathways, protein structure, constraint & interactions⚑ Evidence disagreements 69
Variants where the independent computational evidence doesn't line up with the clinical picture — a QC signal for a second look, not a reclassification.
Predictors agree, ClinVar conflicts 5
ClinVar submitters conflict, but the independent predictors unanimously agree — a QC review flag, not a reclassification.
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TEX11 p.Ala683Thr
Conflicting
Single submitter
spermatogenic failure, X-linked, 2
-
TEX11 p.Asn491Lys
Conflicting
Single submitter
Inborn genetic diseases
-
TEX11 p.Asp321Gly
Conflicting
Single submitter
Inborn genetic diseases
-
TEX11 p.Cys594Tyr
Conflicting
Single submitter
Inborn genetic diseases
-
TEX11 p.Met156Val
Conflicting
Single submitter
spermatogenic failure, X-linked, 2
Predictors lean, ClinVar uncertain 60
ClinVar classifies these uncertain (VUS), but the independent predictors unanimously lean one way — a triage signal for review, not a reclassification.
-
TEX11 p.Ala98Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Arg147Trp
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Arg474Gly
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Arg880Cys
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Asn325Lys
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Asn504Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Asp270Tyr
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Asp637His
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Glu609Lys
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Glu792Asp
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Glu819Gln
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Glu872Lys
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Gly876Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Gly912Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.His207Tyr
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.His283Gln
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.His402Gln
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.His916Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.His916Gln
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.His918Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.His918Gln
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Ile107Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Ile113Leu
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Ile125Met
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Ile236Phe
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Ile236Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Ile488Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Ile646Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Leu375Pro
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Leu393Met
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Leu502Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Leu662Pro
Uncertain significance
Single submitter
Inborn genetic diseases
- TEX11 p.Lys889Arg Uncertain significance Single submitter
-
TEX11 p.Met311Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Met588Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Met767Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Met767Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Pro150Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Pro25Ser
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Pro605Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Pro638Ser
Uncertain significance
Single submitter
Inborn genetic diseases
- TEX11 p.Pro822Ala Uncertain significance Single submitter
-
TEX11 p.Ser163Asn
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Ser163Gly
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Ser226Thr
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Ser412Asn
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Ser492Tyr
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Ser511Pro
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Ser717Leu
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Ser870Pro
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Thr244Ala
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Thr266Ala
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Trp622Arg
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Tyr426Cys
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Tyr481Cys
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Val168Met
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Val19Leu
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Val600Ala
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Val732Ile
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Val748Leu
Uncertain significance
Single submitter
Inborn genetic diseases
Predictors split 4
The independent predictors disagree with each other — read with care.
-
TEX11 p.Ala871Val
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Glu282Lys
Uncertain significance
Single submitter
Inborn genetic diseases
-
TEX11 p.Leu602Phe
Uncertain significance
Single submitter
Inborn genetic diseases
- TEX11 p.Met109Ile Uncertain significance Single submitter
All TEX11 variants
Pathogenic 16
- c.1381-1G>A Single submitter Non-obstructive azoospermia
- c.(159+1_160-1 Single submitter male infertility
- c.1751+2T>G Single submitter Non-obstructive azoospermia
- c.1792+1G>C Single submitter male infertility
- c.37+10228del Single submitter male infertility
- c.(652-1_737+1 Single submitter male infertility
- c.747+1G>A Single submitter male infertility
- c.(-157_-99+1 Single submitter male infertility
- p.Asn403fs Single submitter Non-obstructive azoospermia
- p.Glu336Ter Single submitter Non-obstructive azoospermia
- p.Lys271fs Single submitter Non-obstructive azoospermia
- p.Ser337fs Single submitter male infertility
- p.Trp229Ter Single submitter male infertility
- p.Trp400Ter Single submitter male infertility
- p.Trp856Cys Single submitter Non-obstructive azoospermia
- p.Val85fs Single submitter Non-obstructive azoospermia
Likely pathogenic 1
- p.Asp365fs Single submitter spermatogenic failure, X-linked, 2
Conflicting classifications of pathogenicity 5
- p.Ala683Thr Single submitter spermatogenic failure, X-linked, 2 ⚠
- p.Asn491Lys Single submitter Inborn genetic diseases ⚠
- p.Asp321Gly Single submitter Inborn genetic diseases ⚠
- p.Cys594Tyr Single submitter Inborn genetic diseases ⚠
- p.Met156Val Single submitter spermatogenic failure, X-linked, 2 ⚠
Benign 7
- p.Leu137= Multiple submitters
- p.Asp832Glu Single submitter
- p.Glu300Lys Single submitter
- p.Ile54= Single submitter
- p.Lys143Gln Single submitter
- p.Asp832= No assertion criteria TEX11-related disorder
- p.Glu436Lys No assertion criteria TEX11-related disorder
Benign/Likely benign 2
- p.Ala135= Multiple submitters spermatogenic failure, X-linked, 2
- p.Val748Ala Multiple submitters
Likely benign 31
- c.1484-4T>C Multiple submitters
- c.1793-20A>C Single submitter
- c.2290+8C>A Single submitter
- c.2520+15G>C Single submitter
- c.526-15C>A Single submitter
- c.693-17_693-16del Single submitter
- c.748-20del Single submitter
- p.Ala133= Single submitter
- p.Ala531= Single submitter
- p.Ala815Val Single submitter Inborn genetic diseases
- p.Arg407Lys Single submitter Inborn genetic diseases
- p.Arg839His Single submitter
- p.Asp420= Single submitter
- p.Gln179Arg Single submitter
- p.Gln798Arg Single submitter
- p.His83Arg Single submitter Inborn genetic diseases
- p.Ile482Val Single submitter Inborn genetic diseases
- p.Ile54Val Single submitter Inborn genetic diseases
- p.Ile796Val Single submitter Inborn genetic diseases
- p.Phe441Leu Single submitter Inborn genetic diseases
- p.Thr244Ile Single submitter
- p.Thr389= Single submitter
- p.Thr702= Single submitter
- p.Thr858= Single submitter
- p.Val142Ile Single submitter Inborn genetic diseases
- p.Val74Ile Single submitter Inborn genetic diseases
- c.1157-4dup No assertion criteria TEX11-related disorder
- c.38-7A>C No assertion criteria TEX11-related disorder
- p.Ala815= No assertion criteria TEX11-related disorder
- p.Pro246Ser No assertion criteria TEX11-related disorder
- p.Ser816= No assertion criteria TEX11-related disorder
Uncertain significance 65
- p.Ala871Val Single submitter Inborn genetic diseases ⚠
- p.Ala98Ser Single submitter Inborn genetic diseases ⚠
- p.Arg147Trp Single submitter Inborn genetic diseases ⚠
- p.Arg474Gly Single submitter Inborn genetic diseases ⚠
- p.Arg880Cys Single submitter Inborn genetic diseases ⚠
- p.Asn325Lys Single submitter Inborn genetic diseases ⚠
- p.Asn504Thr Single submitter Inborn genetic diseases ⚠
- p.Asp270Tyr Single submitter Inborn genetic diseases ⚠
- p.Asp637His Single submitter Inborn genetic diseases ⚠
- p.Glu282Lys Single submitter Inborn genetic diseases ⚠
- p.Glu609Lys Single submitter Inborn genetic diseases ⚠
- p.Glu792Asp Single submitter Inborn genetic diseases ⚠
- p.Glu819Gln Single submitter Inborn genetic diseases ⚠
- p.Glu872Lys Single submitter Inborn genetic diseases ⚠
- p.Gly876Val Single submitter Inborn genetic diseases ⚠
- p.Gly912Arg Single submitter Inborn genetic diseases ⚠
- p.His207Tyr Single submitter Inborn genetic diseases ⚠
- p.His283Gln Single submitter Inborn genetic diseases ⚠
- p.His402Gln Single submitter Inborn genetic diseases ⚠
- p.His916Arg Single submitter Inborn genetic diseases ⚠
- p.His916Gln Single submitter Inborn genetic diseases ⚠
- p.His918Arg Single submitter Inborn genetic diseases ⚠
- p.His918Gln Single submitter Inborn genetic diseases ⚠
- p.Ile107Val Single submitter Inborn genetic diseases ⚠
- p.Ile113Leu Single submitter Inborn genetic diseases ⚠
- p.Ile125Met Single submitter Inborn genetic diseases ⚠
- p.Ile236Phe Single submitter Inborn genetic diseases ⚠
- p.Ile236Thr Single submitter Inborn genetic diseases ⚠
- p.Ile383Thr Single submitter Inborn genetic diseases
- p.Ile488Thr Single submitter Inborn genetic diseases ⚠
- p.Ile646Val Single submitter Inborn genetic diseases ⚠
- p.Leu375Pro Single submitter Inborn genetic diseases ⚠
- p.Leu393Met Single submitter Inborn genetic diseases ⚠
- p.Leu502Val Single submitter Inborn genetic diseases ⚠
- p.Leu602Phe Single submitter Inborn genetic diseases ⚠
- p.Leu662Pro Single submitter Inborn genetic diseases ⚠
- p.Lys889Arg Single submitter ⚠
- p.Met109Ile Single submitter ⚠
- p.Met311Val Single submitter Inborn genetic diseases ⚠
- p.Met588Val Single submitter Inborn genetic diseases ⚠
- p.Met767Thr Single submitter Inborn genetic diseases ⚠
- p.Met767Val Single submitter Inborn genetic diseases ⚠
- p.Pro150Ser Single submitter Inborn genetic diseases ⚠
- p.Pro25Ser Single submitter Inborn genetic diseases ⚠
- p.Pro605Arg Single submitter Inborn genetic diseases ⚠
- p.Pro638Ser Single submitter Inborn genetic diseases ⚠
- p.Pro822Ala Single submitter ⚠
- p.Ser163Asn Single submitter Inborn genetic diseases ⚠
- p.Ser163Gly Single submitter Inborn genetic diseases ⚠
- p.Ser226Thr Single submitter Inborn genetic diseases ⚠
- p.Ser412Asn Single submitter Inborn genetic diseases ⚠
- p.Ser492Tyr Single submitter Inborn genetic diseases ⚠
- p.Ser511Pro Single submitter Inborn genetic diseases ⚠
- p.Ser717Leu Single submitter Inborn genetic diseases ⚠
- p.Ser870Pro Single submitter Inborn genetic diseases ⚠
- p.Thr244Ala Single submitter Inborn genetic diseases ⚠
- p.Thr266Ala Single submitter Inborn genetic diseases ⚠
- p.Trp622Arg Single submitter Inborn genetic diseases ⚠
- p.Tyr426Cys Single submitter Inborn genetic diseases ⚠
- p.Tyr481Cys Single submitter Inborn genetic diseases ⚠
- p.Val168Met Single submitter Inborn genetic diseases ⚠
- p.Val19Leu Single submitter Inborn genetic diseases ⚠
- p.Val600Ala Single submitter Inborn genetic diseases ⚠
- p.Val732Ile Single submitter Inborn genetic diseases ⚠
- p.Val748Leu Single submitter Inborn genetic diseases ⚠