SCHEMBL1089208

SCHEMBL1089208

C1=CCC(CN2CCCC(Nc3nccc(N4CCCCCC4)n3)C2)CC1

nearest known ligand 0.56

Predicted protein targets (top 13)

geneUniProtsupporting neighboursconfidence
CXCR4 P61073 2/20 0.56
HRH4 Q9H3N8 8/20 0.47
CCNK O75909 2/20 0.40
CDK12 Q9NYV4 2/20 0.40
MAPK8 P45983 2/20 0.37
HTR1A P08908 2/20 0.37
CCNE1 P24864 1/20 0.37
CDK2 P24941 1/20 0.37
MAPK9 P45984 1/20 0.37
MELK Q14680 1/20 0.36
CDK4 P11802 1/20 0.36
GSK3B P49841 1/20 0.36
IDH1 O75874 1/20 0.36

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL1089565 0.95 CXCR4 (0.63) CXCR4HRH4CCNKCDK12MAPK8
SCHEMBL1088503 0.89 CXCR4 (0.64) CXCR4HRH4CCNKCDK12MAPK8
SCHEMBL1089474 0.88 CXCR4 (0.62) CXCR4HRH4CCNKCDK12MAPK8
SCHEMBL1088211 0.83 CXCR4 (0.71) CXCR4HRH4MAPK8MELK
SCHEMBL1090677 0.82 CXCR4 (0.70) CXCR4HRH4MAPK8CCNE1CDK2
SCHEMBL1089169 0.82 CXCR4 (0.70) CXCR4HRH4MAPK8CCNE1CDK2
SCHEMBL1090637 0.82 CXCR4 (0.70) CXCR4HRH4MAPK8CCNE1CDK2
SCHEMBL1089485 0.81 CXCR4 (0.65) CXCR4HRH4CCNKCDK12MAPK8
SCHEMBL1091382 0.81 CXCR4 (0.64) CXCR4HRH4MAPK8MELKCDK4
SCHEMBL1090329 0.79 CXCR4 (0.62) CXCR4HRH4CCNKCDK12MAPK8

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 6 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-20120156219-A1 NITROGEN-CONTAINING HETEROCYCLIC COMPOUNDS AND MEDICINAL USE THEREOF ONO PHARMACEUTICAL CO., LTD. (JP) 2012-06-21 US disclosed
US-8153625-B2 Nitrogen-containing heterocyclic compounds and medicinal use thereof ONO PHARMACEUTICAL CO., LTD. (JP) 2012-04-10 US disclosed
US-20100221259-A1 NITROGEN-CONTAINING HETEROCYCLIC COMPOUNDS AND MEDICINAL USE THEREOF ONO PHARMACEUTICAL CO., LTD. (JP) 2010-09-02 US disclosed
US-7759336-B2 Nitrogen-containing heterocyclic compounds and medicinal use thereof ONO PHARMACEUTICAL CO., LTD. (JP) 2010-07-20 US disclosed
US-20070167459-A1 Nitrogen-containing heterocyclic compounds and medicinal use thereof ONO PHARMACEUTICAL CO., LTD. (JP) 2007-07-19 US disclosed
EP-1571146-A1 NITROGEN-CONTAINING HETEROCYCLIC COMPOUNDS AND MEDICINAL USE THEREOF ONO PHARMACEUTICAL CO., LTD. (JP) 2005-09-07 EP disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (3 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20100221259-A1 NITROGEN-CONTAINING HETEROCYCLIC COMPOUNDS AND MEDICINAL USE THEREOF CXCR4, CXCL12, CXCR3 CXCR4 1/4885HRH4 130/4885CCNK 793/4885
US-20070167459-A1 Nitrogen-containing heterocyclic compounds and medicinal use thereof CXCR4, CXCL12, CXCR3 CXCR4 1/4885HRH4 130/4885CCNK 793/4885
US-20120156219-A1 NITROGEN-CONTAINING HETEROCYCLIC COMPOUNDS AND MEDICINAL USE THEREOF CXCR4, CXCL12, CXCR3 CXCR4 1/4885HRH4 130/4885CCNK 793/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.