SCHEMBL1089565

SCHEMBL1089565

C1=CCC(CN2CCC(Nc3nccc(N4CCCCCC4)n3)C2)CC1

nearest known ligand 0.63

Predicted protein targets (top 6)

geneUniProtsupporting neighboursconfidence
CXCR4 P61073 2/20 0.63
HRH4 Q9H3N8 14/20 0.46
MAPK8 P45983 2/20 0.38
HRH3 Q9Y5N1 1/20 0.37
CCNK O75909 1/20 0.37
CDK12 Q9NYV4 1/20 0.37

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL1089208 0.95 CXCR4 (0.56) CXCR4HRH4MAPK8CCNKCDK12
SCHEMBL1088211 0.88 CXCR4 (0.71) CXCR4HRH4MAPK8
SCHEMBL1090677 0.87 CXCR4 (0.70) CXCR4HRH4MAPK8HRH3
SCHEMBL1090637 0.87 CXCR4 (0.70) CXCR4HRH4MAPK8HRH3
SCHEMBL1089169 0.87 CXCR4 (0.70) CXCR4HRH4MAPK8HRH3
SCHEMBL1088503 0.83 CXCR4 (0.64) CXCR4HRH4MAPK8CCNKCDK12
SCHEMBL1089474 0.82 CXCR4 (0.62) CXCR4HRH4MAPK8CCNKCDK12
SCHEMBL1091382 0.82 CXCR4 (0.64) CXCR4HRH4MAPK8
SCHEMBL1089479 0.82 CXCR4 (0.64) CXCR4HRH4MAPK8
SCHEMBL1089927 0.81 CXCR4 (0.63) CXCR4HRH4MAPK8

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 6 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-20120156219-A1 NITROGEN-CONTAINING HETEROCYCLIC COMPOUNDS AND MEDICINAL USE THEREOF ONO PHARMACEUTICAL CO., LTD. (JP) 2012-06-21 US disclosed
US-8153625-B2 Nitrogen-containing heterocyclic compounds and medicinal use thereof ONO PHARMACEUTICAL CO., LTD. (JP) 2012-04-10 US disclosed
US-20100221259-A1 NITROGEN-CONTAINING HETEROCYCLIC COMPOUNDS AND MEDICINAL USE THEREOF ONO PHARMACEUTICAL CO., LTD. (JP) 2010-09-02 US disclosed
US-7759336-B2 Nitrogen-containing heterocyclic compounds and medicinal use thereof ONO PHARMACEUTICAL CO., LTD. (JP) 2010-07-20 US disclosed
US-20070167459-A1 Nitrogen-containing heterocyclic compounds and medicinal use thereof ONO PHARMACEUTICAL CO., LTD. (JP) 2007-07-19 US disclosed
EP-1571146-A1 NITROGEN-CONTAINING HETEROCYCLIC COMPOUNDS AND MEDICINAL USE THEREOF ONO PHARMACEUTICAL CO., LTD. (JP) 2005-09-07 EP disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (3 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20100221259-A1 NITROGEN-CONTAINING HETEROCYCLIC COMPOUNDS AND MEDICINAL USE THEREOF CXCR4, CXCL12, CXCR3 CXCR4 1/4885HRH4 130/4885MAPK8 1753/4885
US-20070167459-A1 Nitrogen-containing heterocyclic compounds and medicinal use thereof CXCR4, CXCL12, CXCR3 CXCR4 1/4885HRH4 130/4885MAPK8 1753/4885
US-20120156219-A1 NITROGEN-CONTAINING HETEROCYCLIC COMPOUNDS AND MEDICINAL USE THEREOF CXCR4, CXCL12, CXCR3 CXCR4 1/4885HRH4 130/4885MAPK8 1753/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.