SCHEMBL1090686

SCHEMBL1090686

O=C(c1cccc(F)c1)N1CCCC(N2CCC(Nc3nccc(N4CCCCCC4)n3)C2)C1

nearest known ligand 0.48

Predicted protein targets (top 17)

geneUniProtsupporting neighboursconfidence
HTT P42858 1/20 0.48
CCNK O75909 2/20 0.46
CDK12 Q9NYV4 2/20 0.46
CXCR4 P61073 1/20 0.46
TDP1 Q9NUW8 1/20 0.46
HCRTR1 O43613 1/20 0.45
SMN1; SMN2 Q16637 1/20 0.42
POLB P06746 1/20 0.42
USP2 O75604 1/20 0.42
RAB9A P51151 1/20 0.42
PROKR1 Q8TCW9 1/20 0.41
KMT2A Q03164 2/20 0.41
ALDH1A1 P00352 2/20 0.41
EPHX2 P34913 1/20 0.41
MEN1 O00255 1/20 0.41
CACNA1H O95180 1/20 0.40
MAPK8 P45983 1/20 0.40

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL1089128 0.97 CCNK (0.48) HTTCCNKCDK12CXCR4TDP1
SCHEMBL1090511 0.96 HTT (0.49) HTTCCNKCDK12CXCR4TDP1
SCHEMBL1089294 0.92 TDP1 (0.54) HTTCCNKCDK12CXCR4TDP1
SCHEMBL1090094 0.90 ALDH1A1 (0.48) CCNKCDK12CXCR4RAB9APROKR1
SCHEMBL1090792 0.90 CCNK (0.48) CCNKCDK12CXCR4RAB9APROKR1
SCHEMBL1089893 0.90 CDK12 (0.53) CCNKCDK12CXCR4KMT2AALDH1A1
SCHEMBL1089722 0.90 CXCR4 (0.55) CCNKCDK12CXCR4POLBALDH1A1
SCHEMBL1090070 0.89 TDP1 (0.58) HTTCCNKCDK12CXCR4TDP1
SCHEMBL1089111 0.89 TDP1 (0.58) HTTCCNKCDK12CXCR4TDP1
SCHEMBL1091235 0.88 GFER (0.49) CCNKCDK12CXCR4PROKR1KMT2A

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 6 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-20120156219-A1 NITROGEN-CONTAINING HETEROCYCLIC COMPOUNDS AND MEDICINAL USE THEREOF ONO PHARMACEUTICAL CO., LTD. (JP) 2012-06-21 US disclosed
US-8153625-B2 Nitrogen-containing heterocyclic compounds and medicinal use thereof ONO PHARMACEUTICAL CO., LTD. (JP) 2012-04-10 US disclosed
US-20100221259-A1 NITROGEN-CONTAINING HETEROCYCLIC COMPOUNDS AND MEDICINAL USE THEREOF ONO PHARMACEUTICAL CO., LTD. (JP) 2010-09-02 US disclosed
US-7759336-B2 Nitrogen-containing heterocyclic compounds and medicinal use thereof ONO PHARMACEUTICAL CO., LTD. (JP) 2010-07-20 US disclosed
US-20070167459-A1 Nitrogen-containing heterocyclic compounds and medicinal use thereof ONO PHARMACEUTICAL CO., LTD. (JP) 2007-07-19 US disclosed
EP-1571146-A1 NITROGEN-CONTAINING HETEROCYCLIC COMPOUNDS AND MEDICINAL USE THEREOF ONO PHARMACEUTICAL CO., LTD. (JP) 2005-09-07 EP disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (3 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20100221259-A1 NITROGEN-CONTAINING HETEROCYCLIC COMPOUNDS AND MEDICINAL USE THEREOF CXCR4, CXCL12, CXCR3 HTT 3256/4885CCNK 793/4885CDK12 2526/4885
US-20070167459-A1 Nitrogen-containing heterocyclic compounds and medicinal use thereof CXCR4, CXCL12, CXCR3 HTT 3256/4885CCNK 793/4885CDK12 2526/4885
US-20120156219-A1 NITROGEN-CONTAINING HETEROCYCLIC COMPOUNDS AND MEDICINAL USE THEREOF CXCR4, CXCL12, CXCR3 HTT 3256/4885CCNK 793/4885CDK12 2526/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.