SCHEMBL11917741

SCHEMBL11917741

C[n+]1c(/C=C2\C=C(N3CCNCCN(C4=C/C(=C\c5sc6ccccc6[n+]5C)c5ccccc5N4c4ccccc4)CCNCC3)N(c3ccccc3)c3ccccc32)sc2ccccc21

nearest known ligand 0.37

Predicted protein targets (top 20)

geneUniProtsupporting neighboursconfidence
▸ SNCA P37840 2/20 0.37
▸ HTR7 P34969 11/20 0.36
▸ NPC1 O15118 1/20 0.35
▸ POLB P06746 1/20 0.35
▸ GAA P10253 1/20 0.35
▸ MAPT P10636 1/20 0.35
▸ NR2F2 P24468 1/20 0.35
▸ HTT P42858 1/20 0.35
▸ RAD52 P43351 1/20 0.35
▸ RAB9A P51151 1/20 0.35
▸ SMN1; SMN2 Q16637 1/20 0.35
▸ HTR1A P08908 4/20 0.34
▸ HTR6 P50406 2/20 0.34
▸ HTR2A P28223 1/20 0.34
▸ HTR5A P47898 1/20 0.34
▸ ADRB1 P08588 3/20 0.33
▸ HTR3A P46098 3/20 0.33
▸ ADRB2 P07550 2/20 0.33
▸ HTR3E A5X5Y0 1/20 0.33
▸ HTR3B O95264 1/20 0.33

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL11917722 0.93 SNCA (0.40) SNCANPC1POLBGAAMAPT
SCHEMBL11965791 0.88 HCRTR1 (0.40) SNCANPC1POLBGAAMAPT
SCHEMBL15290725 0.84 SNCA (0.34) SNCANPC1POLBGAAMAPT
SCHEMBL11917744 0.80 SNCA (0.38) SNCANPC1POLBGAAMAPT
SCHEMBL11920298 0.80 MAPT (0.43) SNCANPC1POLBGAAMAPT
SCHEMBL12889794 0.80 SNCA (0.32) SNCA
SCHEMBL13223484 0.79 ADRB2 (0.41) SNCANPC1POLBGAAMAPT
SCHEMBL11917742 0.78 MAPT (0.38) SNCANPC1POLBGAAMAPT
SCHEMBL12595096 0.78 MAPT (0.38) SNCANPC1POLBGAAMAPT
SCHEMBL14089536 0.77 NPC1 (0.32) SNCANPC1POLBRAB9A

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 6 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-8241852-B2 Unsymmetrical cyanine dimer compounds and their application Life Technologies Corporation (US) 2012-08-14 — — US disclosed
US-8242251-B2 Unsymmetrical cyanine dimer compounds and their application Life Technologies Corporation (US) 2012-08-14 — — US disclosed
US-20110143337-A1 UNSYMMETRICAL CYANINE DIMER COMPOUNDS AND THEIR APPLICATION Life Technologies Corporation (US) 2011-06-16 — — US disclosed
US-20110124085-A1 UNSYMMETRICAL CYANINE DIMER COMPOUNDS AND THEIR APPLICATION Life Technologies Corporation (US) 2011-05-26 — — US disclosed
US-7888136-B2 Comprises benzazolium, pyridinium, or quinolinium connected by methine bridge; reporter molecules for detection of RNA in presence of DNA; solid phase synthesis; kits Life Technologies Corporation (US) 2011-02-15 — — US disclosed
US-20080199875-A1 UNSYMMETRICAL CYANINE DIMER COMPOUNDS AND THEIR APPLICATION INVITROGEN CORPORATION (US) 2008-08-21 — — US disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (2 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20080199875-A1 UNSYMMETRICAL CYANINE DIMER COMPOUNDS AND THEIR APPLICATION NSUN2, NSUN3, TRDMT1 SNCA 3350/4885HTR7 335/4885NPC1 4731/4885
US-20110124085-A1 UNSYMMETRICAL CYANINE DIMER COMPOUNDS AND THEIR APPLICATION NSUN2, NSUN3, TRDMT1 SNCA 3350/4885HTR7 335/4885NPC1 4731/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.

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