SCHEMBL13250531

SCHEMBL13250531

c1ccc(C(c2cccc(CN3CCCNCc4cccc(n4)CNCCC3)c2)c2cccc(CN3CCCNCc4cccc(n4)CNCCC3)c2)cc1

nearest known ligand 0.55

Predicted protein targets (top 15)

geneUniProtsupporting neighboursconfidence
▸ CXCR4 P61073 12/20 0.55
▸ SIGMAR1 Q99720 1/20 0.40
▸ ALDH1A1 P00352 1/20 0.40
▸ SMN1; SMN2 Q16637 1/20 0.40
▸ PRMT6 Q96LA8 1/20 0.38
▸ MEN1 O00255 1/20 0.38
▸ CHRM2 P08172 1/20 0.38
▸ CHRM1 P11229 1/20 0.38
▸ ADRA2C P18825 1/20 0.38
▸ CCR2 P41597 1/20 0.38
▸ CXCL12 P48061 1/20 0.38
▸ BLM P54132 1/20 0.38
▸ KMT2A Q03164 1/20 0.38
▸ TDP1 Q9NUW8 1/20 0.38
▸ HRH3 Q9Y5N1 1/20 0.38

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL13250533 0.91 CXCR4 (0.51) CXCR4ALDH1A1SMN1; SMN2PRMT6MEN1
SCHEMBL13250532 0.91 CXCR4 (0.51) CXCR4ALDH1A1SMN1; SMN2MEN1CHRM2
SCHEMBL13250536 0.91 CXCR4 (0.51) CXCR4ALDH1A1SMN1; SMN2MEN1KMT2A
SCHEMBL13250548 0.91 CXCR4 (0.65) CXCR4SIGMAR1MEN1CHRM2CHRM1
SCHEMBL13250537 0.90 CXCR4 (0.60) CXCR4SIGMAR1MEN1CHRM2CHRM1
SCHEMBL13250538 0.87 CXCR4 (0.49) CXCR4ALDH1A1MEN1KMT2A
SCHEMBL13250519 0.86 CXCR4 (0.43) CXCR4SIGMAR1ALDH1A1SMN1; SMN2PRMT6
SCHEMBL13250551 0.85 CXCR4 (0.63) CXCR4MEN1CHRM2CHRM1ADRA2C
SCHEMBL13250484 0.83 CXCR4 (0.60) CXCR4SIGMAR1ALDH1A1MEN1CHRM2
SCHEMBL13250550 0.81 CXCR4 (0.62) CXCR4ALDH1A1MEN1CHRM2CHRM1

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 5 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-8420626-B2 Arene connected polyamine macrocyclic derivatives, preparation methods and pharmaceutical uses thereof BEIJING MOLECULE SCIENCE AND TECHNOLOGY CO., LTD. (CN) 2013-04-16 — — US disclosed
US-8420626-B2 Arene connected polyamine macrocyclic derivatives, preparation methods and pharmaceutical uses thereof BEIJING MOLECULE SCIENCE AND TECHNOLOGY CO., LTD. (CN) 2013-04-16 — — US disclosed
US-20100179116-A1 Arene Connected Polyamine Macrocyclic Derivatives, Preparation Methods and Pharmaceutical Uses Thereof BEIJING MOLECULE SCIENCE AND TECHNOLOGY CO., LTD. (CN) 2010-07-15 — — US disclosed
US-20100179116-A1 Arene Connected Polyamine Macrocyclic Derivatives, Preparation Methods and Pharmaceutical Uses Thereof BEIJING MOLECULE SCIENCE AND TECHNOLOGY CO., LTD. (CN) 2010-07-15 — — US disclosed
EP-2163553-A1 ARENE CONNECTED POLYAMINE MACRORING DERIVATIVES, PREPARATION METHODS AND PHARMACEUTICAL USES THEREOF Beijing Molecule Science and Technology Co., Ltd. (CN) 2010-03-17 — — EP disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (1 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20100179116-A1 Arene Connected Polyamine Macrocyclic Derivatives, Preparation Methods and Pharmaceutical Uses Thereof SRM, SP1, SMS CXCR4 555/4885SIGMAR1 2343/4885ALDH1A1 1826/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.

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