SCHEMBL13254656

SCHEMBL13254656

O=C1CCCc2ccc(OCCN3CCOCC3)cc21

nearest known ligand 0.71

Predicted protein targets (top 9)

geneUniProtsupporting neighboursconfidence
HRH3 Q9Y5N1 5/20 0.71
MAPK14 Q16539 2/20 0.55
KDM4E B2RXH2 1/20 0.54
ALDH1A1 P00352 1/20 0.54
NPC1 O15118 1/20 0.54
MAOA P21397 1/20 0.52
MAOB P27338 1/20 0.52
MEN1 O00255 1/20 0.51
KMT2A Q03164 1/20 0.51

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL28624097 0.90 HRH3 (0.71) HRH3MAPK14KDM4EALDH1A1NPC1
SCHEMBL4815426 0.82 HRH3 (0.79) HRH3MAPK14KDM4EALDH1A1NPC1
SCHEMBL3504559 0.81 USP2 (0.58) HRH3KDM4EALDH1A1NPC1MAOA
SCHEMBL14287616 0.80 HRH3 (0.87) HRH3MAOAMAOBKMT2A
SCHEMBL8571844 0.79 KDM4E (0.62) HRH3MAPK14KDM4EALDH1A1NPC1
SCHEMBL5604414 0.79 KDM4E (0.62) MAPK14KDM4EALDH1A1NPC1MEN1
Hydrochloric Acid SCHEMBL11606453 0.78 KDM4E (0.60) MAPK14KDM4EALDH1A1NPC1MEN1
Hydrochloric Acid SCHEMBL11602807 0.78 KDM4E (0.60) MAPK14KDM4EALDH1A1NPC1MEN1
SCHEMBL13027989 0.78 AURKA (0.59) KDM4EALDH1A1
SCHEMBL13062565 0.78 KDM4E (0.54) HRH3KDM4EALDH1A1NPC1MEN1

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 6 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-20130158024-A1 TRICYCLIC NECROSTATIN COMPOUNDS PRESIDENT AND FELLOWS OF HARVARD COLLEGE 2013-06-20 US disclosed
US-20130158024-A1 TRICYCLIC NECROSTATIN COMPOUNDS PRESIDENT AND FELLOWS OF HARVARD COLLEGE 2013-06-20 US disclosed
US-8324262-B2 Tricyclic necrostatin compounds THE BRIGHAM AND WOMEN'S HOSPITAL, INC. (US) 2012-12-04 US disclosed
US-8324262-B2 Tricyclic necrostatin compounds THE BRIGHAM AND WOMEN'S HOSPITAL, INC. (US) 2012-12-04 US disclosed
US-20100190836-A1 Compounds, Screens, and Methods of Treatment PRESIDENT AND FELLOWS OF HARVARD COLLEGE 2010-07-29 US disclosed
US-20100190836-A1 Compounds, Screens, and Methods of Treatment PRESIDENT AND FELLOWS OF HARVARD COLLEGE 2010-07-29 US disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (2 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20100190836-A1 Compounds, Screens, and Methods of Treatment NLN, HTRA2, CLN6 HRH3 2983/4885MAPK14 2848/4885KDM4E 4533/4885
US-20130158024-A1 TRICYCLIC NECROSTATIN COMPOUNDS HTRA2, AIFM1, BAD HRH3 4386/4885MAPK14 1840/4885KDM4E 4694/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.