Predicted protein targets (top 8)
| gene | UniProt | supporting neighbours | confidence | |
|---|---|---|---|---|
| ▸ | HDAC1 | Q13547 | 15/20 | 0.87 |
| ▸ | HDAC4 | P56524 | 6/20 | 0.82 |
| ▸ | HDAC6 | Q9UBN7 | 6/20 | 0.82 |
| ▸ | MEF2D | Q14814 | 2/20 | 0.63 |
| ▸ | EP300 | Q09472 | 1/20 | 0.61 |
| ▸ | HDAC2 | Q92769 | 3/20 | 0.60 |
| ▸ | SIRT5 | Q9NXA8 | 2/20 | 0.55 |
| ▸ | HTT | P42858 | 1/20 | 0.52 |
Click a target to see other patent compounds predicted against it — the reverse direction, in place.
Similar compounds — the chemically nearest patent molecules
Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.
| Compound | similarity | top predicted | shared targets | |
|---|---|---|---|---|
| SCHEMBL4840206 | 1.00 | HDAC1 (0.87) | HDAC1HDAC4HDAC6MEF2DEP300 | |
| SCHEMBL4839470 | 0.93 | HDAC1 (1.00) | HDAC1HDAC4HDAC6MEF2DEP300 | |
| SCHEMBL4839483 | 0.93 | HDAC1 (1.00) | HDAC1HDAC4HDAC6MEF2DEP300 | |
| SCHEMBL8252891 | 0.90 | HDAC1 (0.80) | HDAC1HDAC4HDAC6MEF2DEP300 | |
| SCHEMBL4828500 | 0.89 | HDAC1 (0.78) | HDAC1HDAC4HDAC6MEF2DEP300 | |
| SCHEMBL8261388 | 0.88 | HDAC1 (0.78) | HDAC1HDAC4HDAC6MEF2DEP300 | |
| SCHEMBL21221149 | 0.87 | HDAC4 (0.75) | HDAC1HDAC4HDAC6MEF2DEP300 | |
| SCHEMBL8113524 | 0.85 | HDAC1 (0.79) | HDAC1HDAC4HDAC6HDAC2 | |
| SCHEMBL8260908 | 0.85 | HDAC1 (0.73) | HDAC1HDAC4HDAC6MEF2DEP300 | |
| SCHEMBL8083026 | 0.84 | HDAC1 (0.79) | HDAC1HDAC4HDAC6MEF2DEP300 |
Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.
Patent provenance — the patents this molecule appears in, and who filed them
Claimed or disclosed in 6 patents. claimed = in the patent's claims; disclosed = body only.
| Patent | Title | Assignee | Published | Priority | Filing | Country | Status |
|---|---|---|---|---|---|---|---|
| US-7345174-B2 | Cytodifferentiating agents and histone deacetylase inhibitors, and methods of use thereof | SLOAN-KETTERING INSTITUTE FOR CANCER RESEARCH (US) | 2008-03-18 | — | — | US | disclosed |
| US-7345174-B2 | Cytodifferentiating agents and histone deacetylase inhibitors, and methods of use thereof | SLOAN-KETTERING INSTITUTE FOR CANCER RESEARCH (US) | 2008-03-18 | — | — | US | disclosed |
| US-20070010669-A1 | Novel class of cytodifferentiating agents and histone deacetylase inhibitors, and methods of use thereof | TRUSTEES OF COLUMBIA UNIVERSITY IN THE CITY OF NEW YORK, THE | 2007-01-11 | — | — | US | disclosed |
| US-20070010669-A1 | Novel class of cytodifferentiating agents and histone deacetylase inhibitors, and methods of use thereof | TRUSTEES OF COLUMBIA UNIVERSITY IN THE CITY OF NEW YORK, THE | 2007-01-11 | — | — | US | disclosed |
| US-20070010536-A1 | Novel class of cytodifferentiating agents and histone deacetylase inhibitors, and methods of use thereof | THE TRUSTEES OF COLUMBIA UNIVERSITY IN THE CITY OF NEW YORK | 2007-01-11 | — | — | US | disclosed |
| US-20070010536-A1 | Novel class of cytodifferentiating agents and histone deacetylase inhibitors, and methods of use thereof | THE TRUSTEES OF COLUMBIA UNIVERSITY IN THE CITY OF NEW YORK | 2007-01-11 | — | — | US | disclosed |
Patent text — is the patent's own abstract consistent with the prediction?
For each of this compound's patents that has machine-readable text (2 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.
| Patent | Title | Text reads most about | Predicted target · text-rank |
|---|---|---|---|
| US-20070010669-A1 | Novel class of cytodifferentiating agents and histone deacetylase inhibitors, and methods of use thereof | ACIN1, HDAC3, HDAC1 | HDAC1 3/4885HDAC4 6/4885HDAC6 14/4885 |
| US-20070010536-A1 | Novel class of cytodifferentiating agents and histone deacetylase inhibitors, and methods of use thereof | ACIN1, HDAC3, HDAC1 | HDAC1 3/4885HDAC4 6/4885HDAC6 14/4885 |
“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.