Known targets — ChEMBL curated mechanism
CHRM1DRD2DRD3DRD4HDAC1HDAC10HDAC11HDAC2HDAC3HDAC4HDAC5HDAC6HDAC7HDAC8HDAC9HRH1HTR2APDE3ASIGMAR1
The experimentally established mechanism targets of Xylose. The predicted profile below is derived independently by chemical similarity — agreement is a validation signal, a miss is honest.
Predicted protein targets (top 12)
| gene | UniProt | supporting neighbours | confidence | |
|---|---|---|---|---|
| ▸ | PDE4A | P27815 | 1/20 | 0.42 |
| ▸ | USP2 | O75604 | 1/20 | 0.40 |
| ▸ | SLCO1B1 | Q9Y6L6 | 1/20 | 0.40 |
| ▸ | TP53 | P04637 | 1/20 | 0.39 |
| ▸ | LMNA | P02545 | 2/20 | 0.36 |
| ▸ | L3MBTL1 | Q9Y468 | 1/20 | 0.34 |
| ▸ | TDP1 | Q9NUW8 | 1/20 | 0.33 |
| ▸ | PAX8 | Q06710 | 1/20 | 0.32 |
| ▸ | OR51E2 | Q9H255 | 1/20 | 0.31 |
| ▸ | AKR1B1 | P15121 | 1/20 | 0.31 |
| ▸ | KDM4E | B2RXH2 | 2/20 | 0.31 |
| ▸ | TGFBR1 | P36897 | 1/20 | 0.30 |
Click a target to see other patent compounds predicted against it — the reverse direction, in place.
Similar compounds — the chemically nearest patent molecules
Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.
| Compound | similarity | top predicted | shared targets | |
|---|---|---|---|---|
| Xylose SCHEMBL6345688 | 1.00 | PDE4A (0.42) | PDE4AUSP2SLCO1B1TP53LMNA | |
| Demannose SCHEMBL6343864 | 0.95 | PDE4A (0.46) | PDE4AUSP2SLCO1B1TP53LMNA | |
| Xylose SCHEMBL27963723 | 0.94 | PDE4A (0.47) | PDE4AUSP2SLCO1B1TP53LMNA | |
| Demannose SCHEMBL3935927 | 0.93 | PDE4A (0.47) | PDE4AUSP2SLCO1B1TP53LMNA | |
| Demannose SCHEMBL18886543 | 0.91 | PDE4A (0.48) | PDE4AUSP2SLCO1B1TP53LMNA | |
| Demannose SCHEMBL5471738 | 0.89 | PDE4A (0.50) | PDE4AUSP2SLCO1B1TP53LMNA | |
| Galactose SCHEMBL9726398 | 0.89 | PDE4A (0.50) | PDE4AUSP2SLCO1B1TP53LMNA | |
| Galactose SCHEMBL10596615 | 0.89 | PDE4A (0.50) | PDE4AUSP2SLCO1B1TP53LMNA | |
| Demannose SCHEMBL30410784 | 0.89 | PDE4A (0.50) | PDE4AUSP2SLCO1B1TP53LMNA | |
| Demannose SCHEMBL27429235 | 0.89 | PDE4A (0.50) | PDE4AUSP2SLCO1B1TP53LMNA |
Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.
Patent provenance — the patents this molecule appears in, and who filed them
Claimed or disclosed in 2 patents. claimed = in the patent's claims; disclosed = body only.
| Patent | Title | Assignee | Published | Priority | Filing | Country | Status |
|---|---|---|---|---|---|---|---|
| EP-2603612-A2 | FERMENTATION PROCESS FOR PRODUCING CHEMICALS | Vogelbusch GmbH (AT) | 2013-06-19 | — | — | EP | disclosed |
| WO-2013064682-A2 | FERMENTATION PROCESS FOR PRODUCING CHEMICALS | VOGELBUSCH GMBH (AT) | 2013-05-10 | — | — | WO | disclosed |