Cytosine

Cytosine

SCHEMBL1673111

Cn1ccc(N)nc1=O.Nc1cc[nH]c(=O)n1

nearest known ligand 0.40

Full drug profile on Sugi Atlas →

Predicted protein targets (top 20)

geneUniProtsupporting neighboursconfidence
BRD4 O60885 1/20 0.40
TAF1 P21675 1/20 0.40
BRPF1 P55201 1/20 0.40
CREBBP Q92793 1/20 0.40
CECR2 Q9BXF3 1/20 0.40
BRD9 Q9H8M2 1/20 0.40
PIK3CB P42338 1/20 0.33
DYRK1A Q13627 1/20 0.33
KDM4E B2RXH2 1/20 0.32
ALDH1A1 P00352 1/20 0.32
CCNT1 O60563 1/20 0.32
CCNA2 P20248 1/20 0.32
CDK2 P24941 1/20 0.32
CDK9 P50750 1/20 0.32
CCNA1 P78396 1/20 0.32
CDK5 Q00535 1/20 0.32
CDK5R1 Q15078 1/20 0.32
CRBN Q96SW2 1/20 0.31
LMNA P02545 1/20 0.31
THRB P10828 1/20 0.31

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL19929 0.84
SCHEMBL27952255 0.84 PIK3CB (0.41) BRD4TAF1BRPF1CREBBPCECR2
Hydrochloric Acid SCHEMBL6853659 0.82 PIK3CB (0.40) BRD4TAF1BRPF1CREBBPCECR2
Iodide SCHEMBL29172953 0.82 PIK3CB (0.40) BRD4TAF1BRPF1CREBBPCECR2
Cytosine SCHEMBL1330400 0.80
Cytosine SCHEMBL4657334 0.80 DYRK1A (0.44) DYRK1ACRBNADORA2AADORA1
Cytosine SCHEMBL1330710 0.80
Cytosine SCHEMBL4059 0.80
Cytosine SCHEMBL6839378 0.79 NOTUM (0.34) LMNATHRBMTORMDM2NCOA1
SCHEMBL28823314 0.79 KDM4E (0.32) BRD4TAF1BRPF1CREBBPCECR2

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 6 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-20160177381-A1 Base-Pair Specific Inter-Strand Locks for Genetic and Epigenetic Detection THE CURATORS OF THE UNIVERSITY OF MISSOURI 2016-06-23 US claimed
WO-2015021055-A1 BASE-PAIR SPECIFIC INTER-STRAND LOCKS FOR GENETIC AND EPIGENETIC DETECTION THE CURATORS OF THE UNIVERSITY OF MISSOURI (US) 2015-02-12 WO claimed
CN-113661242-A Compositions comprising modified cyclic polyribonucleotides and uses thereof 旗舰创业创新第六有限责任公司 2021-11-16 CN disclosed
US-20160177381-A1 Base-Pair Specific Inter-Strand Locks for Genetic and Epigenetic Detection THE CURATORS OF THE UNIVERSITY OF MISSOURI 2016-06-23 US disclosed
WO-2015021055-A1 BASE-PAIR SPECIFIC INTER-STRAND LOCKS FOR GENETIC AND EPIGENETIC DETECTION THE CURATORS OF THE UNIVERSITY OF MISSOURI (US) 2015-02-12 WO disclosed
US-20110091887-A1 METHOD FOR DETECTION OF METHYLCYTOSINE USING PHOTORESPONSIVE PROBE JAPAN ADVANCED INSTITUTE OF SCIENCE AND TECHNOLOGY (JP) 2011-04-21 US disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (1 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20110091887-A1 METHOD FOR DETECTION OF METHYLCYTOSINE USING PHOTORESPONSIVE PROBE DNMT1, NT5C3B, MPG BRD4 1786/4885TAF1 1396/4885BRPF1 1011/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.