SCHEMBL305284

SCHEMBL305284

COC(=O)CCCCCC(C)C(C)=O

nearest known ligand 0.57

Predicted protein targets (top 15)

geneUniProtsupporting neighboursconfidence
TSHR P16473 3/20 0.52
L3MBTL1 Q9Y468 1/20 0.49
LMNA P02545 4/20 0.47
ALDH1A1 P00352 1/20 0.47
PABPC1 P11940 1/20 0.42
APOBEC3A P31941 1/20 0.42
APOBEC3G Q9HC16 1/20 0.42
KMT2A Q03164 1/20 0.40
PPARG P37231 2/20 0.40
HPGD P15428 1/20 0.40
RECQL P46063 1/20 0.38
LTA4H P09960 1/20 0.38
PPARA Q07869 1/20 0.37
EPHX2 P34913 1/20 0.37
MAPT P10636 1/20 0.37

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL7943410 1.00 TSHR (0.52) TSHRL3MBTL1LMNAALDH1A1PABPC1
SCHEMBL16489316 1.00 TSHR (0.52) TSHRL3MBTL1LMNAALDH1A1PABPC1
SCHEMBL20767532 0.98 TSHR (0.54) TSHRL3MBTL1LMNAALDH1A1PABPC1
SCHEMBL30593797 0.98 TSHR (0.54) TSHRL3MBTL1LMNAALDH1A1PABPC1
SCHEMBL27210237 0.92 TSHR (0.56) TSHRL3MBTL1LMNAALDH1A1KMT2A
SCHEMBL494822 0.85 TSHR (0.52) TSHRL3MBTL1LMNAALDH1A1PABPC1
SCHEMBL495446 0.85 TSHR (0.52) TSHRL3MBTL1LMNAALDH1A1PABPC1
SCHEMBL494661 0.85 TSHR (0.52) TSHRL3MBTL1LMNAALDH1A1PABPC1
SCHEMBL494385 0.85 TSHR (0.52) TSHRL3MBTL1LMNAALDH1A1PABPC1
SCHEMBL494833 0.85 TSHR (0.52) TSHRL3MBTL1LMNAALDH1A1PABPC1

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 101 patents — showing the first 20. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-20180156810-A1 FLUORESCENT COMPOUNDS BIOTIUM, INC. 2018-06-07 US disclosed
US-9791450-B2 Fluorescent compounds BIOTIUM, INC. (US) 2017-10-17 US disclosed
EP-2223086-B2 FLUORESCENT COMPOUNDS - LABELING DYES BIOTIUM INC (US) 2016-06-01 EP disclosed
US-20160033520-A1 FLUORESCENT COMPOUNDS BIOTIUM, INC. 2016-02-04 US disclosed
US-20150330973-A1 Kits for analysis of biological samples ANASPEC INCORPORATED (US) 2015-11-19 US disclosed
US-20150330973-A1 Kits for analysis of biological samples ANASPEC INCORPORATED (US) 2015-11-19 US disclosed
US-20150330973-A1 Kits for analysis of biological samples ANASPEC INCORPORATED (US) 2015-11-19 US disclosed
US-20150259535-A1 Fluorescent dyes ANASPEC INC (US) 2015-09-17 US disclosed
US-20150259535-A1 Fluorescent dyes ANASPEC INC (US) 2015-09-17 US disclosed
US-20150259535-A1 Fluorescent dyes ANASPEC INC (US) 2015-09-17 US disclosed
WO-2009078970-A1 FLUORESCENT COMPOUNDS BIOTIUM, INC. (US) 2009-06-25 WO disclosed
US-20090156799-A1 Methods of making dyes DIWU ZHENJUN 2009-06-18 US disclosed
US-20090156799-A1 Methods of making dyes DIWU ZHENJUN 2009-06-18 US disclosed
US-20090156799-A1 Methods of making dyes DIWU ZHENJUN 2009-06-18 US disclosed
US-7465810-B2 Chemically reactive carbocyanine dyes that are intramolecularly connected or crosslinked between the 1-position and 3'-position by a polyamino acid linker; reduction of the ground state aggregation caused by steric hindrance of the crosslinking results in more fluorescent on proteins and nucleic acids ANASPEC, INC. (US) 2008-12-16 US disclosed
US-7465810-B2 Chemically reactive carbocyanine dyes that are intramolecularly connected or crosslinked between the 1-position and 3'-position by a polyamino acid linker; reduction of the ground state aggregation caused by steric hindrance of the crosslinking results in more fluorescent on proteins and nucleic acids ANASPEC, INC. (US) 2008-12-16 US disclosed
US-7465810-B2 Chemically reactive carbocyanine dyes that are intramolecularly connected or crosslinked between the 1-position and 3'-position by a polyamino acid linker; reduction of the ground state aggregation caused by steric hindrance of the crosslinking results in more fluorescent on proteins and nucleic acids ANASPEC, INC. (US) 2008-12-16 US disclosed
WO-2008127139-A1 INDICYANINE DYES AND THE DERIVATIVES THEREOF FOR ANALYSING BIOLOGICAL MICROMOLECULES INSTITUT MOLEKULYARNOI BIOLOGII IM. V.A. ENGELDARDTA ROSSIISKOI AKADEMII NAUK (RU) 2008-10-23 WO disclosed
US-20060121503-A1 Chemically reactive carbocyanine dyes that are intramolecularly connected or crosslinked between the 1-position and 3'-position by a polyamino acid linker; reduction of the ground state aggregation caused by steric hindrance of the crosslinking results in more fluorescent on proteins and nucleic acids ANASPEC, INC. 2006-06-08 US disclosed
WO-2006047452-A2 REACTIVE 1,3’-CROSSLINKED CARBOCYANINES AND THEIR BIOCONJUGATES ANASPEC, INC. (US) 2006-05-04 WO disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (2 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20060121503-A1 Chemically reactive carbocyanine dyes that are intramolecularly connected or crosslinked between the 1-position and 3'-position by a polyamino acid linker; reduction of the ground state aggregation caused by steric hindrance of the crosslinking results in more fluorescent on proteins and nucleic acids LIG1, LIG4, LIG3 TSHR 4019/4885L3MBTL1 264/4885LMNA 807/4885
US-20090156799-A1 Methods of making dyes CBR3, CBR1, GLO1 TSHR 4331/4885L3MBTL1 912/4885LMNA 2597/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.