SCHEMBL3338846

SCHEMBL3338846

N#Cc1cccc(-c2nc3ccccc3[nH]2)c1

nearest known ligand 0.61

Predicted protein targets (top 20)

geneUniProtsupporting neighboursconfidence
KDM4E B2RXH2 10/20 0.61
NPC1 O15118 9/20 0.61
RAB9A P51151 9/20 0.61
ALDH1A1 P00352 9/20 0.61
SMN1; SMN2 Q16637 9/20 0.61
HPGD P15428 5/20 0.61
HSD17B10 Q99714 4/20 0.61
TP53 P04637 3/20 0.61
GAA P10253 1/20 0.60
PKN1 Q16512 2/20 0.54
PKN2 Q16513 2/20 0.54
CHEK2 O96017 1/20 0.53
PKM P14618 3/20 0.53
ABCB11 O95342 1/20 0.53
NPSR1 Q6W5P4 1/20 0.53
MAPT P10636 5/20 0.53
USP2 O75604 1/20 0.53
TDP1 Q9NUW8 1/20 0.53
PIM1 P11309 1/20 0.52
PIM3 Q86V86 1/20 0.52

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL28594113 0.88 SMN1; SMN2 (0.59) KDM4ENPC1RAB9AALDH1A1SMN1; SMN2
SCHEMBL20982453 0.87 RHEB (0.52) KDM4ENPC1RAB9AALDH1A1SMN1; SMN2
SCHEMBL16147689 0.86 CHEK2 (0.56) KDM4ENPC1RAB9AALDH1A1SMN1; SMN2
SCHEMBL17801048 0.86 PDPK1 (0.62) KDM4ENPC1RAB9AALDH1A1SMN1; SMN2
SCHEMBL9725325 0.85 KDM4E (0.61) KDM4ENPC1RAB9AALDH1A1SMN1; SMN2
SCHEMBL3417301 0.84 NPC1 (0.78) KDM4ENPC1RAB9AALDH1A1SMN1; SMN2
SCHEMBL31154120 0.83 MEN1 (0.57) KDM4ENPC1RAB9AALDH1A1SMN1; SMN2
SCHEMBL7277536 0.83 PKN1 (0.56) KDM4ENPC1RAB9AALDH1A1SMN1; SMN2
SCHEMBL3337258 0.83 NPC1 (0.66) KDM4ENPC1RAB9AALDH1A1SMN1; SMN2
SCHEMBL8858911 0.82 KDM4E (0.69) KDM4ENPC1RAB9AALDH1A1SMN1; SMN2

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 13 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
WO-2024118936-A1 2-ARYLBENZIMIDAZOLE COMPOUNDS FOR THE TREATMENT OF HEMOGLOBINOPATHIES TRANQUIS THERAPEUTICS, INC. (US) 2024-06-06 WO claimed
US-12195432-B2 2-arylbenzimidazoles as Ppargc1a activators for treating neurodegenerative diseases THE BOARD OF TRUSTEES OF THE LELAND STANFORD JUNIOR UNIVERSITY (US) 2025-01-14 US disclosed
WO-2024137505-A2 METHOD OF IMPROVING CELL FITNESS IN AN EX-VIVO CELL POPULATION TRANQUIS THERAPEUTICS, INC. (US) 2024-06-27 WO disclosed
WO-2024118936-A1 2-ARYLBENZIMIDAZOLE COMPOUNDS FOR THE TREATMENT OF HEMOGLOBINOPATHIES TRANQUIS THERAPEUTICS, INC. (US) 2024-06-06 WO disclosed
CN-116635028-A Modulators of c-MYC mRNA translation and their use in the treatment of cancer 艾尼莫生物科技公司 2023-08-22 CN disclosed
US-20210300877-A1 2-ARYLBENZIMIDAZOLES AS PPARGC1A ACTIVATORS FOR TREATING NEURODEGENERATIVE DISEASES THE BOARD OF TRUSTEES OF THE LELAND STANFORD JUNIOR UNIVERSITY (US) 2021-09-30 US disclosed
US-11111217-B2 2-arylbenzimidazoles as Ppargc1a activators for treating neurodegenerative diseases THE BOARD OF TRUSTEES OF THE LELAND STANFORD JUNIOR UNIVERSITY (US) 2021-09-07 US disclosed
US-20210061769-A1 2-ARYLBENZIMIDAZOLES AS PPARGC1A ACTIVATORS FOR TREATING NEURODEGENERATIVE DISEASES THE BOARD OF TRUSTEES OF THE LELAND STANFORD JUNIOR UNIVERSITY (US) 2021-03-04 US disclosed
US-10851066-B2 2-arylbenzimidazoles as PPARGC1A activators for treating neurodegenerative diseases THE BOARD OF TRUSTEES OF THE LELAND STANFORD JUNIOR UNIVERSITY (US) 2020-12-01 US disclosed
US-20200299244-A1 2-ARYLBENZIMIDAZOLES AS PPARGC1A ACTIVATORS FOR TREATING NEURODEGENERATIVE DISEASES THE BOARD OF TRUSTEES OF THE LELAND STANFORD JUNIOR UNIVERSITY (US) 2020-09-24 US disclosed
WO-2020033359-A1 2-ARYLBENZIMIDAZOLES AS PPARGC1A ACTIVATORS FOR TREATING NEURODEGENERATIVE DISEASES THE BOARD OF TRUSTEES OF THE LELAND STANFORD JUNIOR UNIVERSITY (US) 2020-02-13 WO disclosed
US-8198307-B2 Imidazole derivatives having aryl piperidine substituent, method for preparation thereof and pharmaceutical compositions containing same KOREA RESEARCH INSTITUTE OF CHEMICAL TECHNOLOGY (KR) 2012-06-12 US disclosed
US-20100145054-A1 IMIDAZOLE DERIVATIVES HAVING ARYL PIPERIDINE SUBSTITUENT, METHOD FOR PREPARATION THEREOF AND PHARMACEUTICAL COMPOSITIONS CONTAINING SAME KOREA RESEARCH INSTITUTE OF CHEMICAL TECHNOLOGY (KR) 2010-06-10 US disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (7 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20200299244-A1 2-ARYLBENZIMIDAZOLES AS PPARGC1A ACTIVATORS FOR TREATING NEURODEGENERATIVE DISEASES PPARG, PPARA, PPARD KDM4E 2310/4885NPC1 379/4885RAB9A 1910/4885
US-20210300877-A1 2-ARYLBENZIMIDAZOLES AS PPARGC1A ACTIVATORS FOR TREATING NEURODEGENERATIVE DISEASES PPARG, PPARA, PPARD KDM4E 2901/4885NPC1 989/4885RAB9A 2214/4885
US-20210061769-A1 2-ARYLBENZIMIDAZOLES AS PPARGC1A ACTIVATORS FOR TREATING NEURODEGENERATIVE DISEASES PPARG, PPARA, PPARD KDM4E 2302/4885NPC1 502/4885RAB9A 2015/4885
US-11111217-B2 2-arylbenzimidazoles as Ppargc1a activators for treating neurodegenerative diseases PPARG, PPARA, PPARD KDM4E 2302/4885NPC1 502/4885RAB9A 2015/4885
US-10851066-B2 2-arylbenzimidazoles as PPARGC1A activators for treating neurodegenerative diseases PPARG, PPARA, PPARD KDM4E 2310/4885NPC1 379/4885RAB9A 1910/4885
US-12195432-B2 2-arylbenzimidazoles as Ppargc1a activators for treating neurodegenerative diseases PPARG, PPARA, PPARD KDM4E 2901/4885NPC1 989/4885RAB9A 2214/4885
US-20100145054-A1 IMIDAZOLE DERIVATIVES HAVING ARYL PIPERIDINE SUBSTITUENT, METHOD FOR PREPARATION THEREOF AND PHARMACEUTICAL COMPOSITIONS CONTAINING SAME TYR, MCHR1, MCHR2 KDM4E 220/4885NPC1 223/4885RAB9A 687/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.