SCHEMBL3586531

SCHEMBL3586531

Cc1cc(C#CC2CCCC2)ccc1C(=O)Nc1ccc2c(c1)OCCN2

nearest known ligand 0.46

Predicted protein targets (top 20)

geneUniProtsupporting neighboursconfidence
NPC1 O15118 11/20 0.46
RAB9A P51151 11/20 0.46
PIR O00625 1/20 0.42
GSK3B P49841 1/20 0.42
HSF1 Q00613 1/20 0.42
TRPV1 Q8NER1 1/20 0.42
LRRK2 Q5S007 1/20 0.41
ALDH1A1 P00352 3/20 0.40
MAPT P10636 3/20 0.40
CYP1A2 P05177 1/20 0.40
CYP3A4 P08684 1/20 0.40
ALOX12 P18054 1/20 0.40
CYP2C19 P33261 1/20 0.40
TP53 P04637 5/20 0.38
SMN1; SMN2 Q16637 5/20 0.38
HPGD P15428 2/20 0.38
QPCT Q16769 1/20 0.38
PKM P14618 1/20 0.37
MAPK1 P28482 1/20 0.37
OGA O60502 2/20 0.37

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL3593338 0.96 NPC1 (0.47) NPC1RAB9APIRGSK3BHSF1
SCHEMBL13757269 0.88 HIF1A (0.47) NPC1RAB9APIRGSK3BHSF1
SCHEMBL3587189 0.87 NPC1 (0.62) NPC1RAB9AALDH1A1MAPTCYP1A2
SCHEMBL3591277 0.85 NPC1 (0.43) NPC1RAB9ATRPV1ALDH1A1MAPT
SCHEMBL3577556 0.85 NPC1 (0.47) NPC1RAB9ATRPV1ALDH1A1CYP3A4
SCHEMBL3585307 0.83 NPC1 (0.65) NPC1RAB9AALDH1A1MAPTCYP1A2
SCHEMBL5037380 0.82 NPC1 (0.39) NPC1RAB9ALRRK2ALDH1A1MAPT
SCHEMBL13544513 0.82 NPC1 (0.50) NPC1RAB9APIRGSK3BHSF1
SCHEMBL5249640 0.80 HIF1A (0.45) NPC1RAB9APIRGSK3BHSF1
SCHEMBL13544485 0.80 NPC1 (0.52) NPC1RAB9APIRGSK3BHSF1

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 5 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-20100004222-A1 Amide Derivatives as Ion-Channel Ligands and Pharmaceutical Compositions and Methods of Using the Same RENOVIS, INC. (US) 2010-01-07 US claimed
US-20140193363-A1 NOVEL BENZIMIDAZOLE DERIVATIVES ENANTA PHARMACEUTICALS, INC. (US) 2014-07-10 US disclosed
US-20100004222-A1 Amide Derivatives as Ion-Channel Ligands and Pharmaceutical Compositions and Methods of Using the Same RENOVIS, INC. (US) 2010-01-07 US disclosed
US-7576099-B2 Amide derivatives as ion-channel ligands and pharmaceutical compositions and methods of using the same RENOVIS, INC. (US) 2009-08-18 US disclosed
US-20080300243-A1 Amide Derivatives as Ion-Channel Ligands and Pharmaceutical Compositions and Methods of Using the Same RENOVIS, INC. 2008-12-04 US disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (3 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20100004222-A1 Amide Derivatives as Ion-Channel Ligands and Pharmaceutical Compositions and Methods of Using the Same TRPV1, TRPA1, TRPV2 NPC1 879/4885RAB9A 2452/4885PIR 2157/4885
US-20080300243-A1 Amide Derivatives as Ion-Channel Ligands and Pharmaceutical Compositions and Methods of Using the Same TRPV1, TRPA1, TRPV2 NPC1 959/4885RAB9A 2274/4885PIR 2579/4885
US-20140193363-A1 NOVEL BENZIMIDAZOLE DERIVATIVES EIF2AK2, ZC3HAV1, HAVCR2 NPC1 159/4885RAB9A 3679/4885PIR 2242/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.