SCHEMBL3590012

SCHEMBL3590012

Cc1ccc(-c2ccc3ccn(CC(=O)N4CCN(C5CCCC5)CC4)c3c2)cc1

nearest known ligand 0.53

Predicted protein targets (top 12)

geneUniProtsupporting neighboursconfidence
▸ GRIN2B Q13224 13/20 0.53
▸ HTT P42858 1/20 0.46
▸ NPSR1 Q6W5P4 1/20 0.46
▸ GRIN1 Q05586 3/20 0.43
▸ CYP2C9 P11712 2/20 0.43
▸ KCNH2 Q12809 1/20 0.43
▸ CYP2C19 P33261 1/20 0.43
▸ ALDH1A1 P00352 2/20 0.42
▸ MAPK1 P28482 1/20 0.42
▸ HSD17B10 Q99714 1/20 0.42
▸ HTR7 P34969 2/20 0.42
▸ KDM4E B2RXH2 1/20 0.42

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL3589774 0.82 GRIN2B (0.53) GRIN2BGRIN1CYP2C9KCNH2CYP2C19
SCHEMBL1018400 0.74 ALDH1A1 (0.47) HTTNPSR1KCNH2CYP2C19ALDH1A1
SCHEMBL3604340 0.74 KDM4E (0.43) GRIN2BNPSR1CYP2C9CYP2C19ALDH1A1
SCHEMBL1018217 0.73 ALDH1A1 (0.46) HTTNPSR1KCNH2CYP2C19ALDH1A1
SCHEMBL3607170 0.73 KDM4E (0.51) GRIN2BNPSR1CYP2C9CYP2C19ALDH1A1
SCHEMBL1015085 0.72 ALDH1A1 (0.47) HTTNPSR1KCNH2ALDH1A1MAPK1
SCHEMBL3595316 0.72 NPC1 (0.44) GRIN2BNPSR1CYP2C9CYP2C19ALDH1A1
SCHEMBL3770022 0.72 LMNA (0.55) HTTCYP2C9CYP2C19ALDH1A1MAPK1
SCHEMBL3591928 0.71 GRIN2B (0.46) GRIN2BNPSR1CYP2C9CYP2C19ALDH1A1
SCHEMBL3602467 0.71 KDM4E (0.46) GRIN2BNPSR1CYP2C9CYP2C19ALDH1A1

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 2 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-7807704-B2 Bicyclic, nitrogen-containing compounds modulating CXCR4 and/or CCXCKR2 CHEMOCENTRYX, INC. (US) 2010-10-05 — — US disclosed
US-20070275965-A1 CXCR4 modulators CHEMOCENTRYX, INC. (US) 2007-11-29 — — US disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (1 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20070275965-A1 CXCR4 modulators CXCL12, CXCR4, CXCR1 GRIN2B 2950/4885HTT 1553/4885NPSR1 2297/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.

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