SCHEMBL3596889

SCHEMBL3596889

O=C(Cn1c(C(F)(F)F)nc2ccccc21)NCCNCC1CCCCC1

nearest known ligand 0.66

Predicted protein targets (top 17)

geneUniProtsupporting neighboursconfidence
HTT P42858 1/20 0.66
L3MBTL1 Q9Y468 1/20 0.66
ALDH1A1 P00352 3/20 0.58
GAA P10253 1/20 0.58
SMN1; SMN2 Q16637 1/20 0.58
CYP2C9 P11712 4/20 0.51
CYP2C19 P33261 3/20 0.51
CYP1A2 P05177 2/20 0.51
CYP2D6 P10635 1/20 0.51
TP53 P04637 1/20 0.50
MAPT P10636 1/20 0.48
CYP3A4 P08684 1/20 0.48
MEN1 O00255 1/20 0.47
KMT2A Q03164 1/20 0.47
HDAC6 Q9UBN7 1/20 0.45
LMNA P02545 1/20 0.45
APEX1 P27695 1/20 0.44

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL3598193 0.85 LMNA (0.57) HTTL3MBTL1ALDH1A1GAASMN1; SMN2
SCHEMBL3589932 0.85 LMNA (0.47) HTTL3MBTL1ALDH1A1GAASMN1; SMN2
SCHEMBL3587773 0.83 ALDH1A1 (0.50) HTTL3MBTL1ALDH1A1GAASMN1; SMN2
SCHEMBL3608186 0.83 KDM4E (0.54) HTTALDH1A1SMN1; SMN2HDAC6LMNA
SCHEMBL3596888 0.82 HTT (0.63) HTTL3MBTL1ALDH1A1GAASMN1; SMN2
SCHEMBL3595689 0.82 ALDH1A1 (0.51) HTTL3MBTL1ALDH1A1GAASMN1; SMN2
SCHEMBL3610556 0.82 KDM4E (0.62) HTTL3MBTL1ALDH1A1
SCHEMBL3599795 0.78 HDAC6 (0.47) L3MBTL1ALDH1A1SMN1; SMN2HDAC6
SCHEMBL3600244 0.76 GAA (0.58) HTTALDH1A1GAASMN1; SMN2CYP2C9
SCHEMBL3596283 0.74 HDAC6 (0.44) HTTALDH1A1SMN1; SMN2MEN1KMT2A

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 2 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-7807704-B2 Bicyclic, nitrogen-containing compounds modulating CXCR4 and/or CCXCKR2 CHEMOCENTRYX, INC. (US) 2010-10-05 US disclosed
US-20070275965-A1 CXCR4 modulators CHEMOCENTRYX, INC. (US) 2007-11-29 US disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (1 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20070275965-A1 CXCR4 modulators CXCL12, CXCR4, CXCR1 HTT 1553/4885L3MBTL1 2170/4885ALDH1A1 662/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.