SCHEMBL541984

SCHEMBL541984

O=C(c1cnc(NC23CC4(F)CC(F)(CC(F)(C4)C2)C3)nc1C(F)(F)F)N1CCS(O)(O)CC1

nearest known ligand 0.39

Predicted protein targets (top 16)

geneUniProtsupporting neighboursconfidence
CXCR4 P61073 1/20 0.39
NFKB1 P19838 5/20 0.33
JUN P05412 4/20 0.33
NFKB2 Q00653 4/20 0.33
RELA Q04206 4/20 0.33
SCD O00767 1/20 0.33
CNR2 P34972 2/20 0.31
MAPT P10636 1/20 0.31
CYP1A2 P05177 1/20 0.31
CYP3A4 P08684 1/20 0.31
CYP2D6 P10635 1/20 0.31
CYP2C9 P11712 1/20 0.31
CYP2C19 P33261 1/20 0.31
VNN1 O95497 2/20 0.30
GAA P10253 1/20 0.30
ATF1 P18846 1/20 0.30

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL541599 0.95 CXCR4 (0.36) CXCR4NFKB1JUNNFKB2RELA
SCHEMBL541983 0.92 CXCR4 (0.39) CXCR4NFKB1JUNNFKB2RELA
SCHEMBL541472 0.91 CXCR4 (0.36) CXCR4NFKB1JUNNFKB2RELA
SCHEMBL541598 0.88 CXCR4 (0.36) CXCR4NFKB1JUNNFKB2RELA
SCHEMBL541577 0.87 LRRK2 (0.40) CXCR4VNN1
SCHEMBL15397203 0.86 CXCR4 (0.37) CXCR4NFKB1JUNNFKB2RELA
SCHEMBL6521503 0.85 HDAC3 (0.41) CXCR4NFKB1JUNNFKB2RELA
SCHEMBL542020 0.85 CXCR4 (0.38) CXCR4NFKB1JUNNFKB2RELA
SCHEMBL15397190 0.84 CXCR4 (0.35) CXCR4NFKB1JUNNFKB2RELA
SCHEMBL541926 0.83 CXCR4 (0.37) CXCR4NFKB1JUNNFKB2RELA

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 7 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-20130310373-A1 PYRIMIDINE COMPOUND ASTELLAS PHARMA INC. (JP) 2013-11-21 US claimed
US-8524727-B2 Pyrimidine compound ASTELLAS PHARMA INC. (JP) 2013-09-03 US claimed
EP-2415765-A1 PYRIMIDINE COMPOUND Astellas Pharma Inc. (JP) 2012-02-08 EP claimed
US-20110053912-A1 PYRIMIDINE COMPOUND ASTELLAS PHARMA INC. (JP) 2011-03-03 US claimed
US-20130310373-A1 PYRIMIDINE COMPOUND ASTELLAS PHARMA INC. (JP) 2013-11-21 US disclosed
US-8524727-B2 Pyrimidine compound ASTELLAS PHARMA INC. (JP) 2013-09-03 US disclosed
US-20110053912-A1 PYRIMIDINE COMPOUND ASTELLAS PHARMA INC. (JP) 2011-03-03 US disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (2 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20110053912-A1 PYRIMIDINE COMPOUND CNR2, CNR1, P2RY2 CXCR4 350/4885NFKB1 2708/4885JUN 242/4885
US-20130310373-A1 PYRIMIDINE COMPOUND CNR2, CNR1, P2RY2 CXCR4 206/4885NFKB1 2619/4885JUN 324/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.