SCHEMBL541472

SCHEMBL541472

O=C(c1cnc(NC23CC4CC(F)(CC(F)(C4)C2)C3)nc1C(F)(F)F)N1CCS(O)(O)CC1

nearest known ligand 0.36

Predicted protein targets (top 10)

geneUniProtsupporting neighboursconfidence
CXCR4 P61073 1/20 0.36
SCD O00767 1/20 0.32
MAPK8 P45983 2/20 0.32
EPHX2 P34913 1/20 0.32
VNN1 O95497 1/20 0.31
JUN P05412 1/20 0.31
NFKB1 P19838 1/20 0.31
NFKB2 Q00653 1/20 0.31
RELA Q04206 1/20 0.31
MAPK9 P45984 1/20 0.30

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL541473 0.93 CXCR4 (0.36) CXCR4SCDMAPK8EPHX2JUN
SCHEMBL541984 0.91 CXCR4 (0.39) CXCR4SCDVNN1JUNNFKB1
SCHEMBL542025 0.88 LRRK2 (0.39) CXCR4
SCHEMBL15397201 0.88 CXCR4 (0.34) CXCR4SCDMAPK8EPHX2
SCHEMBL6521503 0.88 HDAC3 (0.41) CXCR4SCDMAPK8EPHX2VNN1
SCHEMBL541599 0.86 CXCR4 (0.36) CXCR4SCDJUNNFKB1NFKB2
SCHEMBL541926 0.86 CXCR4 (0.37) CXCR4SCDMAPK8VNN1JUN
SCHEMBL541918 0.85 GSK3A (0.43) CXCR4SCDMAPK8EPHX2
SCHEMBL542020 0.84 CXCR4 (0.38) CXCR4SCDVNN1JUNNFKB1
SCHEMBL541530 0.83 CXCR4 (0.34) CXCR4SCDMAPK8

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 4 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-20130310373-A1 PYRIMIDINE COMPOUND ASTELLAS PHARMA INC. (JP) 2013-11-21 US disclosed
US-8524727-B2 Pyrimidine compound ASTELLAS PHARMA INC. (JP) 2013-09-03 US disclosed
EP-2415765-A1 PYRIMIDINE COMPOUND Astellas Pharma Inc. (JP) 2012-02-08 EP disclosed
US-20110053912-A1 PYRIMIDINE COMPOUND ASTELLAS PHARMA INC. (JP) 2011-03-03 US disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (2 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20110053912-A1 PYRIMIDINE COMPOUND CNR2, CNR1, P2RY2 CXCR4 350/4885SCD 1093/4885MAPK8 2238/4885
US-20130310373-A1 PYRIMIDINE COMPOUND CNR2, CNR1, P2RY2 CXCR4 206/4885SCD 1251/4885MAPK8 2453/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.