SCHEMBL5838404

SCHEMBL5838404

Cc1nc(-c2cc3nccc(Cl)c3s2)sc1C(=O)Cl

nearest known ligand 0.41

Predicted protein targets (top 17)

geneUniProtsupporting neighboursconfidence
KDM4E B2RXH2 8/20 0.41
RAB9A P51151 2/20 0.41
SMN1; SMN2 Q16637 2/20 0.41
POLB P06746 2/20 0.41
NPC1 O15118 1/20 0.41
GAA P10253 3/20 0.41
MAPT P10636 3/20 0.40
ALDH1A1 P00352 5/20 0.39
KMT2A Q03164 3/20 0.38
MEN1 O00255 1/20 0.38
HPGD P15428 1/20 0.38
CASP3 P42574 1/20 0.36
SENP8 Q96LD8 1/20 0.36
SENP7 Q9BQF6 1/20 0.36
SENP6 Q9GZR1 1/20 0.36
CDC7 O00311 1/20 0.36
DBF4 Q9UBU7 1/20 0.36

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL5838366 0.90 KDM4E (0.53) KDM4ERAB9ASMN1; SMN2POLBNPC1
SCHEMBL5837975 0.85 KDM4E (0.57) KDM4ERAB9ASMN1; SMN2NPC1GAA
SCHEMBL5838894 0.82 HTR2C (0.50) KDM4EPOLB
SCHEMBL5838441 0.82 CNR1 (0.56) KDM4ERAB9ASMN1; SMN2NPC1GAA
SCHEMBL7127531 0.78 MCHR1 (0.31) KDM4ERAB9AGAA
SCHEMBL5240751 0.73 RAB9A (0.54) KDM4ERAB9ASMN1; SMN2POLBNPC1
SCHEMBL7127856 0.73 PDE10A (0.40) KDM4ERAB9ASMN1; SMN2NPC1GAA
SCHEMBL5241215 0.72 KDM4E (0.50) KDM4EMAPTALDH1A1
SCHEMBL198179 0.71 GRIN3B (0.38) RAB9ANPC1KMT2AMEN1HPGD
SCHEMBL3059795 0.71 KDM4E (0.76) KDM4ERAB9ASMN1; SMN2POLBNPC1

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 3 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-6995171-B2 Bicyclic pyrimidine and pyrimidine derivatives useful as anticancer agents AGOURON PHARMACEUTICALS, INC. (US) 2006-02-07 US disclosed
US-20040171590-A1 Bicyclic pyrimidine and pyrimidine derivatives useful as anticancer agents AUTRY CHRISTOPHER (US) 2004-09-02 US disclosed
WO-2003000194-A2 THIENOPYRIDINE AND THIENOPYRIMIDINE ANTICANCER AGENTS PFIZER INC. (US) 2003-01-03 WO disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (1 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20040171590-A1 Bicyclic pyrimidine and pyrimidine derivatives useful as anticancer agents TK1, TYMP, DPYD KDM4E 3176/4885RAB9A 2464/4885SMN1; SMN2 2051/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.