SCHEMBL6000640

SCHEMBL6000640

O=C(O)c1ccc(CNCc2nc(-c3ccc(CNCc4ccc(C5CCCCC5)cc4)cc3)cs2)cc1

nearest known ligand 0.44

Predicted protein targets (top 20)

geneUniProtsupporting neighboursconfidence
MRE11 P49959 1/20 0.44
KDM4E B2RXH2 5/20 0.43
RAB9A P51151 4/20 0.43
NPC1 O15118 3/20 0.43
SMN1; SMN2 Q16637 3/20 0.43
ALDH1A1 P00352 3/20 0.43
TRPA1 O75762 1/20 0.42
KMT2A Q03164 2/20 0.41
MEN1 O00255 1/20 0.41
DHODH Q02127 1/20 0.41
POLB P06746 1/20 0.41
GAA P10253 1/20 0.41
HTT P42858 1/20 0.41
HAO1 Q9UJM8 1/20 0.40
S1PR1 P21453 2/20 0.40
CPT2 P23786 1/20 0.39
CPT1A P50416 1/20 0.39
CPT1B Q92523 1/20 0.39
HDAC6 Q9UBN7 2/20 0.39
HDAC1 Q13547 1/20 0.39

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL6000108 0.94 MRE11 (0.41) MRE11KDM4ERAB9ANPC1SMN1; SMN2
SCHEMBL5999047 0.93 HDAC3 (0.50) MRE11KDM4ERAB9ANPC1SMN1; SMN2
SCHEMBL5999835 0.92 HRH3 (0.45) MRE11KDM4ERAB9ANPC1SMN1; SMN2
SCHEMBL6000636 0.90 RXRA (0.39) MRE11KDM4ERAB9ANPC1SMN1; SMN2
SCHEMBL5999739 0.85 MRE11 (0.40) MRE11KDM4ERAB9ANPC1SMN1; SMN2
SCHEMBL6000178 0.82 HRH3 (0.44) MRE11KDM4ERAB9ANPC1SMN1; SMN2
SCHEMBL5585410 0.82 HDAC3 (0.53) MRE11KDM4ERAB9ANPC1SMN1; SMN2
SCHEMBL6000469 0.82 HDAC8 (0.53) MRE11KDM4ERAB9ANPC1SMN1; SMN2
SCHEMBL6001067 0.82 RAB9A (0.42) MRE11KDM4ERAB9ANPC1SMN1; SMN2
SCHEMBL5585928 0.81 HDAC3 (0.52) MRE11KDM4ERAB9ANPC1SMN1; SMN2

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 6 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-20060122181-A1 Heteroaromatic pentacyclic compound and medicinal use thereof JAPAN TOBACCO INC. (JP) 2006-06-08 US claimed
CN-1780823-A Heteroaromatic pentacyclic compound and medicinal use thereof JAPAN TOBACCO INC (JP) 2006-05-31 CN claimed
EP-1553091-A1 HETEROAROMATIC PENTACYCLIC COMPOUND AND MEDICINAL USE THEREOF JAPAN TOBACCO INC. (JP) 2005-07-13 EP claimed
US-20060122181-A1 Heteroaromatic pentacyclic compound and medicinal use thereof JAPAN TOBACCO INC. (JP) 2006-06-08 US disclosed
CN-1780823-A Heteroaromatic pentacyclic compound and medicinal use thereof JAPAN TOBACCO INC (JP) 2006-05-31 CN disclosed
EP-1553091-A1 HETEROAROMATIC PENTACYCLIC COMPOUND AND MEDICINAL USE THEREOF JAPAN TOBACCO INC. (JP) 2005-07-13 EP disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (1 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20060122181-A1 Heteroaromatic pentacyclic compound and medicinal use thereof PTPN11, PTPN1, PTPN3 MRE11 4881/4885KDM4E 1731/4885RAB9A 1393/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.