Predicted protein targets (top 14)
| gene | UniProt | supporting neighbours | confidence | |
|---|---|---|---|---|
| ▸ | HDAC1 | Q13547 | 15/20 | 0.74 |
| ▸ | HDAC4 | P56524 | 7/20 | 0.71 |
| ▸ | MEF2D | Q14814 | 3/20 | 0.71 |
| ▸ | HDAC3 | O15379 | 9/20 | 0.60 |
| ▸ | HDAC2 | Q92769 | 6/20 | 0.60 |
| ▸ | HDAC6 | Q9UBN7 | 5/20 | 0.60 |
| ▸ | HDAC7 | Q8WUI4 | 4/20 | 0.60 |
| ▸ | HDAC10 | Q969S8 | 4/20 | 0.60 |
| ▸ | HDAC11 | Q96DB2 | 4/20 | 0.60 |
| ▸ | HDAC8 | Q9BY41 | 4/20 | 0.60 |
| ▸ | HDAC9 | Q9UKV0 | 4/20 | 0.60 |
| ▸ | HDAC5 | Q9UQL6 | 4/20 | 0.60 |
| ▸ | EP300 | Q09472 | 1/20 | 0.51 |
| ▸ | NCOR2 | Q9Y618 | 1/20 | 0.51 |
Click a target to see other patent compounds predicted against it — the reverse direction, in place.
Similar compounds — the chemically nearest patent molecules
Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.
| Compound | similarity | top predicted | shared targets | |
|---|---|---|---|---|
| SCHEMBL8361569 | 0.85 | HDAC1 (1.00) | HDAC1HDAC4MEF2DHDAC3HDAC2 | |
| SCHEMBL21232162 | 0.83 | HDAC4 (1.00) | HDAC1HDAC4MEF2DEP300 | |
| SCHEMBL1689407 | 0.82 | HDAC4 (0.72) | HDAC1HDAC4MEF2DHDAC3HDAC2 | |
| SCHEMBL5322812 | 0.78 | HDAC6 (0.72) | HDAC1HDAC4MEF2DHDAC3HDAC2 | |
| SCHEMBL30444774 | 0.75 | HDAC1 (0.71) | HDAC1HDAC4HDAC3HDAC2HDAC6 | |
| SCHEMBL12515064 | 0.74 | HDAC1 (0.75) | HDAC1HDAC4HDAC3HDAC2HDAC6 | |
| SCHEMBL29728194 | 0.73 | HDAC1 (0.69) | HDAC1HDAC4HDAC3HDAC2HDAC6 | |
| SCHEMBL13338207 | 0.73 | NPC1 (0.62) | HDAC1HDAC4HDAC3HDAC2HDAC6 | |
| SCHEMBL1613715 | 0.73 | HDAC1 (0.68) | HDAC1HDAC4HDAC3HDAC2HDAC6 | |
| SCHEMBL30858825 | 0.73 | HDAC6 (0.68) | HDAC1HDAC4HDAC3HDAC2HDAC6 |
Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.
Patent provenance — the patents this molecule appears in, and who filed them
Claimed or disclosed in 7 patents. claimed = in the patent's claims; disclosed = body only.
| Patent | Title | Assignee | Published | Priority | Filing | Country | Status |
|---|---|---|---|---|---|---|---|
| EP-1896395-A2 | MODIFIED MALONATE DERIVATIVES | Merck & Co., Inc. (US) | 2008-03-12 | — | — | EP | claimed |
| WO-2007002248-A2 | MODIFIED MALONATE DERIVATIVES | MERCK & CO., INC. (US) | 2007-01-04 | — | — | WO | claimed |
| EP-1896395-B1 | MODIFIED MALONATE DERIVATIVES | MERCK SHARP & DOHME (US) | 2015-07-15 | — | — | EP | disclosed |
| US-8158825-B2 | Modified malonate derivatives | MERCK SHARP & DOHME CORP. (US) | 2012-04-17 | — | — | US | disclosed |
| US-20100160327-A1 | Modified Malonate Derivatives | MERCK SHARP & DOHME LLC | 2010-06-24 | — | — | US | disclosed |
| EP-1896395-A2 | MODIFIED MALONATE DERIVATIVES | Merck & Co., Inc. (US) | 2008-03-12 | — | — | EP | disclosed |
| WO-2007002248-A2 | MODIFIED MALONATE DERIVATIVES | MERCK & CO., INC. (US) | 2007-01-04 | — | — | WO | disclosed |
Patent text — is the patent's own abstract consistent with the prediction?
For each of this compound's patents that has machine-readable text (1 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.
| Patent | Title | Text reads most about | Predicted target · text-rank |
|---|---|---|---|
| US-20100160327-A1 | Modified Malonate Derivatives | ME2, ME3, ME1 | HDAC1 6/4885HDAC4 32/4885MEF2D 2598/4885 |
“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.