Daunorubicin

Daunorubicin

SCHEMBL289431

COc1cccc2c1C(=O)c1c(O)c3c(c(O)c1C2=O)C[C@@](O)(C(C)=O)C[C@@H]3OC1CC(N)C(O)C(C)O1

nearest known ligand 1.00 ✓ in ChEMBL — recovers established targets

Full drug profile on Sugi Atlas →

Known targets — ChEMBL curated mechanism

TOP2A

The experimentally established mechanism targets of Daunorubicin. The predicted profile below is derived independently by chemical similarity — agreement is a validation signal, a miss is honest.

Predicted protein targets (top 20)

geneUniProtsupporting neighboursconfidence
TOP2A known ✓ P11388 5/20 1.00
MEN1 O00255 10/20 1.00
THRB P10828 10/20 1.00
KMT2A Q03164 10/20 1.00
BLM P54132 9/20 1.00
RECQL P46063 8/20 1.00
BRCA1 P38398 7/20 1.00
SMN1; SMN2 Q16637 7/20 1.00
HIF1A Q16665 7/20 1.00
MAPT P10636 7/20 1.00
TDP1 Q9NUW8 6/20 1.00
MAPK1 P28482 6/20 1.00
CYP3A4 P08684 5/20 1.00
USP2 O75604 5/20 1.00
HTT P42858 5/20 1.00
CYP1A2 P05177 4/20 1.00
CHRM1 P11229 4/20 1.00
KDM4E B2RXH2 4/20 1.00
ALDH1A1 P00352 4/20 1.00
TP53 P04637 3/20 1.00

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
Daunorubicin SCHEMBL6423269 1.00 MEN1 (1.00) MEN1THRBKMT2ABLMRECQL
Daunorubicin SCHEMBL15159339 1.00 MEN1 (1.00) MEN1THRBKMT2ABLMRECQL
Daunorubicin SCHEMBL319903 1.00 MEN1 (1.00) MEN1THRBKMT2ABLMRECQL
Daunorubicin SCHEMBL6423273 1.00 MEN1 (1.00) MEN1THRBKMT2ABLMRECQL
Daunorubicin SCHEMBL12864552 1.00 MEN1 (1.00) MEN1THRBKMT2ABLMRECQL
Daunorubicin SCHEMBL24914323 1.00 MEN1 (1.00) MEN1THRBKMT2ABLMRECQL
Daunorubicin SCHEMBL18926545 1.00 MEN1 (1.00) MEN1THRBKMT2ABLMRECQL
Daunorubicin SCHEMBL13840952 1.00 MEN1 (1.00) MEN1THRBKMT2ABLMRECQL
Daunorubicin SCHEMBL22694307 1.00 MEN1 (1.00) MEN1THRBKMT2ABLMRECQL
Daunorubicin SCHEMBL10061862 1.00 MEN1 (1.00) MEN1THRBKMT2ABLMRECQL

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 219 patents — showing the first 20. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
CN-109293613-B Epidaunorubicin intermediate compound 鲁南制药集团股份有限公司 2023-04-25 CN claimed
CN-109942647-B Method for synthesizing epirubicin intermediate body surface daunorubicin 鲁南制药集团股份有限公司 2023-04-18 CN claimed
US-11371026-B2 DoxA protein mutant, and coding gene and applications thereof ZHEJIANG HISUN PHARMACEUTICAL CO., LTD. (CN) 2022-06-28 US claimed
CN-110283170-B Preparation of compound and application of compound in inhibiting growth of various tumor cells 清华大学 2020-11-06 CN claimed
CN-107693487-B Anthracycline antitumor antibiotic compound micelle and preparation method and application thereof 烟台大学 2020-03-24 CN claimed
CN-106282042-B Streptomyces boscalis and method for producing epidaunorubicin by using same 浙江海正药业股份有限公司 2019-12-10 CN claimed
US-10081652-B2 Purification of epidaunorubicin Medac Gesellschaft für klinische Spezialpräparate mbH (DE) 2018-09-25 US claimed
EP-3137475-B1 PURIFICATION OF EPIDAUNORUBICIN MEDAC GES FUER KLINISCHE SPEZIALPRAEPARATE MBH (DE) 2018-06-27 EP claimed
EP-1990405-B1 Genetically modified strains producing anthracycline metabolites useful as cancer drugs PROVIVO OY (FI) 2017-07-26 EP claimed
EP-3137475-A1 PURIFICATION OF EPIDAUNORUBICIN medac Gesellschaft für klinische Spezialpräparate mbH (DE) 2017-03-08 EP claimed
EP-1990405-A1 Genetically modified strains producing anthracycline metabolites useful as cancer drugs W. C. Heraeus GmbH (DE) 2008-11-12 EP claimed
EP-1814525-A2 STABLE LYOPHILIZED ANTHRACYCLINE GLYCOSIDES Sicor Inc. (US) 2007-08-08 EP claimed
WO-2007067779-A2 METHODS AND COMPOSITIONS FOR DRUG DELIVERY ENHANCEMENT TSRL, INC. (US) 2007-06-14 WO claimed
US-20070004653-A1 Stable lyophilized anthracycline glycosides SICOR, INC. 2007-01-04 US claimed
WO-2006122309-A2 STABLE LYOPHILIZED ANTHRACYCLINE GLYCOSIDES SICOR, INC. (US) 2006-11-16 WO claimed
WO-2006111561-A1 IMPROVED MICROBIAL PRODUCTION OF ANTHRACYCLINS DSM IP ASSETS B.V. (NL) 2006-10-26 WO claimed
US-5945518-A Process for the preparation of anthracycline antibiotics Sicor Societa' Italiana Corticosteroida S.p.A. (IT) 1999-08-31 US claimed
EP-0819132-B1 A PROCESS FOR THE PREPARATION OF ANTHRACYCLINE ANTIBIOTICS SICOR SPA (IT) 1999-06-09 EP claimed
EP-0819132-A1 A PROCESS FOR THE PREPARATION OF ANTHRACYCLINE ANTIBIOTICS SICOR Società Italiana Corticosteroidi S.p.A. (IT) 1998-01-21 EP claimed
WO-1996029335-A1 A PROCESS FOR THE PREPARATION OF ANTHRACYCLINE ANTIBIOTICS SICOR SOCIETA' ITALIANA CORTICOSTEROIDI S.P.A. (IT) 1996-09-26 WO claimed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (2 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-10081652-B2 Purification of epidaunorubicin FAU, EFTUD2, DUT TOP2A 80/4885MEN1 4083/4885THRB 3992/4885
US-20070004653-A1 Stable lyophilized anthracycline glycosides TREH, CD38, GANAB TOP2A 7/4885MEN1 1864/4885THRB 4793/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.