Trifluoroacetic Acid

Trifluoroacetic Acid

SCHEMBL3145797

CCCCCCCC(C)(C)N.O=C(O)C(F)(F)F

nearest known ligand 0.53

Full drug profile on Sugi Atlas →

Predicted protein targets (top 11)

geneUniProtsupporting neighboursconfidence
CES2 O00748 3/20 0.53
FAAH O00519 7/20 0.47
CES1 P23141 5/20 0.47
MEN1 O00255 1/20 0.47
CYP1A2 P05177 1/20 0.47
KMT2A Q03164 1/20 0.47
HSD17B10 Q99714 1/20 0.47
SMPD1 P17405 4/20 0.44
FDPS P14324 1/20 0.44
LPAR1 Q92633 1/20 0.44
LPAR3 Q9UBY5 1/20 0.44

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
Pivalate SCHEMBL3414635 0.88 SMPD1 (0.47) CES2MEN1KMT2AHSD17B10SMPD1
Bicarbonate SCHEMBL27083092 0.88 SMPD1 (0.50) CES2MEN1KMT2AHSD17B10SMPD1
Trifluoroacetic Acid SCHEMBL28160743 0.86 CES2 (0.55) CES2FAAHCES1MEN1CYP1A2
Acetic Acid SCHEMBL3139399 0.86 SMPD1 (0.48) CES2MEN1KMT2AHSD17B10SMPD1
Acetic Acid SCHEMBL9224621 0.86 SMPD1 (0.48) CES2MEN1KMT2AHSD17B10SMPD1
Acetic Acid SCHEMBL4367052 0.86 SMPD1 (0.48) CES2MEN1KMT2AHSD17B10SMPD1
Acetic Acid SCHEMBL11691620 0.86 SMPD1 (0.48) CES2MEN1KMT2AHSD17B10SMPD1
Bicarbonate SCHEMBL1689393 0.86 FDPS (0.48) CES2MEN1KMT2AHSD17B10SMPD1
Trifluoroacetic Acid SCHEMBL27124069 0.84 MEN1 (0.38) CES2FAAHCES1MEN1CYP1A2
Acetic Acid SCHEMBL3140123 0.84 FDPS (0.47) CES2MEN1KMT2AHSD17B10SMPD1

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 14 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-7642344-B2 Methods and compositions for determining the sequence of nucleic acid molecules OPERON BIOTECHNOLOGIES, INC. (US) 2010-01-05 US disclosed
US-20080009613-A1 Methods and compositions for determining the sequence of nucleic acid molecules OPERON BIOTECHNOLOGIES, INC. (US) 2008-01-10 US disclosed
US-7247434-B2 Methods and compositions for determining the sequence of nucleic acid molecules OPERON BIOTECHNOLOGIES, INC. (US) 2007-07-24 US disclosed
US-7052846-B2 Methods and compositions for analyzing nucleic acid molecules utilizing sizing techniques OPERON BIOTECHNOLOGIES, INC. (US) 2006-05-30 US disclosed
US-20060057566-A1 METHODS AND COMPOSITIONS FOR ANALYZING NUCLEIC ACID MOLECULES UTILIZING SIZING TECHNIQUES QIAGEN GENOMICS, INC. (US) 2006-03-16 US disclosed
US-20040115694-A1 Methods and compositions for determining the sequence of nucleic acid molecules QIAGEN GENOMICS, INC. 2004-06-17 US disclosed
US-6623928-B2 Determining the sequence of a nucleic acid; obtain sample, incubate with labeled probe, separate labeled nucleotide sequences, remove label, detect labels QIAGEN GENOMICS, INC. 2003-09-23 US disclosed
US-6613508-B1 Spectrometry; electrophoresis; chromatography; separation; cleavage; labels; probes; primers; hybridization; use of tags in a wide variety of nucleic acid reactions where separation of nucleic acid molecules based on size is required QIAGEN GENOMICS, INC. 2003-09-02 US disclosed
EP-0990047-B1 METHODS AND COMPOSITIONS FOR ANALYZING NUCLEIC ACIDS BY MASS SPECTROMETRY QIAGEN GENOMICS INC (US) 2003-05-14 EP disclosed
US-20020119456-A1 Methods and compositions for determining the sequence of nucleic acid molecules AGILENT TECHNOLOGIES, INC. 2002-08-29 US disclosed
US-6312893-B1 GENERATING TAGGED NUCLEIC ACID FRAGMENTS WHICH ARE COMPLEMENTARY TO SELECTED TARGET NUCLEIC ACID MOLECULE; SEPARATION OF TAGGED FRAGMENTS; CLEAVING THE TAGS; DETECTING TAGS BY NON-FLUORESCENT SPECTROMETRY OR POTENTIOMETRY QIAGEN GENOMICS, INC. 2001-11-06 US disclosed
EP-0990047-A2 METHODS AND COMPOSITIONS FOR ANALYZING NUCLEIC ACID MOLECULES UTILIZING SIZING TECHNIQUES Rapigene, Inc. (US) 2000-04-05 EP disclosed
WO-1999005319-A9 METHODS AND COMPOUNDS FOR ANALYZING NUCLEIC ACIDS BY MASS SPECTROMETRY RAPIGENE INC (US) 1999-06-17 WO disclosed
WO-1999005319-A2 METHODS AND COMPOUNDS FOR ANALYZING NUCLEIC ACIDS BY MASS SPECTROMETRY RAPIGENE, INC. (US) 1999-02-04 WO disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (1 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20080009613-A1 Methods and compositions for determining the sequence of nucleic acid molecules CPSF6, RNMT, POLM CES2 2530/4885FAAH 2651/4885CES1 3027/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.