SCHEMBL3609348

SCHEMBL3609348

Cc1ccc(-c2ccc3cc(C(=O)O)n(CC(=O)NCCNCC4CCCCC4)c3c2)cc1

nearest known ligand 0.40

Predicted protein targets (top 15)

geneUniProtsupporting neighboursconfidence
NPC1 O15118 3/20 0.40
RAB9A P51151 1/20 0.40
GPR35 Q9HC97 2/20 0.39
CNR1 P21554 1/20 0.39
AVPR1B P47901 8/20 0.38
CCR2 P41597 1/20 0.37
F10 P00742 1/20 0.36
CCR9 P51686 1/20 0.36
KDM4E B2RXH2 1/20 0.36
ALDH1A1 P00352 1/20 0.36
MMP13 P45452 1/20 0.36
LMNA P02545 1/20 0.36
ALOX15 P16050 1/20 0.36
TSHR P16473 1/20 0.36
MAPK1 P28482 1/20 0.36

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL3603674 0.91 MTNR1A (0.41) NPC1RAB9ACNR1AVPR1BMMP13
SCHEMBL3599501 0.84 GPR35 (0.38) GPR35CCR2F10CCR9KDM4E
SCHEMBL3602467 0.82 KDM4E (0.46) NPC1RAB9ACNR1KDM4EALDH1A1
SCHEMBL3591928 0.81 GRIN2B (0.46) NPC1RAB9ACNR1KDM4EALDH1A1
SCHEMBL3586855 0.80 BRD4 (0.44) NPC1RAB9ACNR1KDM4EALDH1A1
SCHEMBL3586999 0.80 KMT2A (0.49) NPC1RAB9ALMNA
SCHEMBL3596258 0.80 NPC1 (0.47) NPC1RAB9ACNR1
SCHEMBL13115992 0.77 HPGD (0.38) F10KDM4EALDH1A1TSHRMAPK1
SCHEMBL3604146 0.76 KDM4E (0.45) NPC1RAB9AKDM4EALDH1A1LMNA
SCHEMBL3591120 0.76 KDM4E (0.47) KDM4EALDH1A1LMNATSHR

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 2 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-7807704-B2 Bicyclic, nitrogen-containing compounds modulating CXCR4 and/or CCXCKR2 CHEMOCENTRYX, INC. (US) 2010-10-05 US disclosed
US-20070275965-A1 CXCR4 modulators CHEMOCENTRYX, INC. (US) 2007-11-29 US disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (1 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20070275965-A1 CXCR4 modulators CXCL12, CXCR4, CXCR1 NPC1 334/4885RAB9A 602/4885GPR35 1339/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.