SCHEMBL4887341

SCHEMBL4887341

c1ccc(CN[C@H]2CCCc3cccnc32)cc1

nearest known ligand 0.69

Predicted protein targets (top 9)

geneUniProtsupporting neighboursconfidence
HDAC1 Q13547 2/20 0.69
HDAC6 Q9UBN7 2/20 0.69
CXCR4 P61073 7/20 0.51
GRIN2B Q13224 3/20 0.48
KDM4E B2RXH2 2/20 0.46
ALDH1A1 P00352 2/20 0.45
CYP3A4 P08684 4/20 0.44
CYP2D6 P10635 4/20 0.44
GRIN1 Q05586 1/20 0.41

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL4562865 1.00 HDAC1 (0.69) HDAC1HDAC6CXCR4GRIN2BKDM4E
SCHEMBL13909820 0.94 HDAC1 (0.76) HDAC1HDAC6CXCR4KDM4EALDH1A1
SCHEMBL21055028 0.88 HDAC1 (0.68) HDAC1HDAC6CXCR4KDM4EALDH1A1
SCHEMBL4065807 0.88 HDAC1 (0.68) HDAC1HDAC6CXCR4GRIN2BKDM4E
SCHEMBL5656928 0.88 HDAC1 (0.61) HDAC1HDAC6CXCR4KDM4EALDH1A1
SCHEMBL14025462 0.87 HDAC1 (0.60) HDAC1HDAC6CXCR4KDM4EALDH1A1
SCHEMBL4066161 0.86 HDAC1 (0.63) HDAC1HDAC6CXCR4KDM4EALDH1A1
SCHEMBL30379489 0.86 HDAC1 (0.61) HDAC1HDAC6CXCR4CYP2D6
Bromide SCHEMBL5140296 0.85 HDAC1 (0.62) HDAC1HDAC6CXCR4KDM4EALDH1A1
SCHEMBL29823139 0.85 HDAC1 (0.62) HDAC1HDAC6CXCR4KDM4EALDH1A1

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 5 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-20080045537-A1 Chemical Compounds SMITHKLINE BEECHAM CORPORATION 2008-02-21 US disclosed
US-20080045537-A1 Chemical Compounds SMITHKLINE BEECHAM CORPORATION 2008-02-21 US disclosed
US-20080045537-A1 Chemical Compounds SMITHKLINE BEECHAM CORPORATION 2008-02-21 US disclosed
EP-1789045-A2 CHEMICAL COMPOUNDS SMITHKLINE BEECHAM CORPORATION (US) 2007-05-30 EP disclosed
WO-2006023400-A2 CHEMICAL COMPOUNDS SMITHKLINE BEECHAM CORPORATION (US) 2006-03-02 WO disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (1 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20080045537-A1 Chemical Compounds CCR5, CXCR4, CXCR3 HDAC1 844/4885HDAC6 568/4885CXCR4 2/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.