SCHEMBL5505060

SCHEMBL5505060

CC(C)(C)[Si](OC[C@H]1O[C@@H](n2cnc3c(=O)[nH]c(N)nc32)C(OCCO)C1O[Si](c1ccccc1)(c1ccccc1)C(C)(C)C)(c1ccccc1)c1ccccc1

nearest known ligand 0.47

Predicted protein targets (top 12)

geneUniProtsupporting neighboursconfidence
▸ HINT1 P49773 6/20 0.47
▸ TAS1R3 Q7RTX0 1/20 0.46
▸ TAS1R1 Q7RTX1 1/20 0.46
▸ HPGD P15428 1/20 0.45
▸ GSK3A P49840 2/20 0.45
▸ RPS6KA3 P51812 2/20 0.45
▸ MAPK14 Q16539 2/20 0.45
▸ NT5E P21589 1/20 0.43
▸ TAAR1 Q96RJ0 1/20 0.43
▸ PNP P00491 1/20 0.42
▸ TGM2 P21980 1/20 0.41
▸ KRAS P01116 5/20 0.40

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL7063499 0.92 HINT1 (0.53) HINT1TAS1R3TAS1R1HPGDGSK3A
SCHEMBL7063503 0.92 HINT1 (0.53) HINT1TAS1R3TAS1R1HPGDGSK3A
SCHEMBL5507306 0.91 HINT1 (0.44) HINT1TAS1R3TAS1R1HPGDGSK3A
SCHEMBL5504409 0.88 HINT1 (0.41) HINT1TAS1R3TAS1R1HPGDGSK3A
SCHEMBL6468412 0.85 HINT1 (0.64) HINT1GSK3ARPS6KA3MAPK14NT5E
SCHEMBL17936222 0.85 HINT1 (0.64) HINT1GSK3ARPS6KA3MAPK14NT5E
SCHEMBL17198404 0.84 HINT1 (0.54) HINT1TAS1R3TAS1R1HPGDGSK3A
SCHEMBL881724 0.83 NT5E (0.57) HINT1TAS1R3TAS1R1GSK3ARPS6KA3
SCHEMBL16264223 0.80 TAS1R3 (0.44) HINT1TAS1R3TAS1R1HPGDGSK3A
SCHEMBL14364934 0.80 TAS1R3 (0.44) HINT1TAS1R3TAS1R1HPGDGSK3A

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 11 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
EP-0977767-B1 AMINOOXY-MODIFIED OLIGONUCLEOTIDES ISIS PHARMACEUTICALS INC (US) 2007-09-19 — — EP disclosed
US-6849723-B2 Oligonucleotide analogs having modified dimers ISIS PHARMACEUTICALS, INC. (US) 2005-02-01 — — US disclosed
US-20030088079-A1 AMINOOXY-MODIFIED NUCLEOSIDIC COMPOUNDS AND OLIGOMERIC COMPOUNDS PREPARED THEREFROM IONIS PHARMACEUTICALS, INC. 2003-05-08 — — US disclosed
EP-0977767-A4 AMINOOXY-MODIFIED OLIGONUCLEOTIDES ISIS PHARMACEUTICALS INC (US) 2003-04-23 — — EP disclosed
US-6420549-B1 NUCLEOTIDE SEQUENCES FOR USE AS TOOLS IN GENETIC ENGINEERING AND CONTROLLING TRANSLATION ISIS PHARMACEUTICALS, INC. 2002-07-16 — — US disclosed
US-6194598-B1 Aminooxy-modified oligonucleotide synthetic intermediates ISIS PHARMACEUTICALS, INC. 2001-02-27 — — US disclosed
US-6172209-B1 MOLECULAR HYBRIDIZATION, GENETIC ENGINEERING; NUCLEASE RESISTANCE ISIS PHARMACEUTICALS INC. 2001-01-09 — — US disclosed
US-6127533-A SPECIFICALLY HYBRIDIZABLE WITH A SELECTED SEQUENCE OF RNA OR DNA; DIAGNOSIS OF DISEASES ISIS PHARMACEUTICALS, INC. (US) 2000-10-03 — — US disclosed
EP-0977767-A1 AMINOOXY-MODIFIED OLIGONUCLEOTIDES ISIS PHARMACEUTICALS, INC. (US) 2000-02-09 — — EP disclosed
WO-1998035978-A9 AMINOOXY-MODIFIED OLIGONUCLEOTIDES — 1999-01-14 — — WO disclosed
WO-1998035978-A1 AMINOOXY-MODIFIED OLIGONUCLEOTIDES ISIS PHARMACEUTICALS, INC. (US) 1998-08-20 — — WO disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (1 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20030088079-A1 AMINOOXY-MODIFIED NUCLEOSIDIC COMPOUNDS AND OLIGOMERIC COMPOUNDS PREPARED THEREFROM HNRNPM, RNASEH1, HNRNPF HINT1 479/4885TAS1R3 4572/4885TAS1R1 4668/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.

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