Benzimidazole

Benzimidazole

SCHEMBL19876247

CS(C)(=O)=O.c1ccc2[nH]cnc2c1

nearest known ligand 0.46

Full drug profile on Sugi Atlas →

Predicted protein targets (top 20)

geneUniProtsupporting neighboursconfidence
SMN1; SMN2 Q16637 3/20 0.46
PARP1 P09874 2/20 0.46
PDPK1 O15530 1/20 0.46
CA12 O43570 1/20 0.46
ALOX15 P16050 1/20 0.46
CA9 Q16790 1/20 0.46
TNKS2 Q9H2K2 1/20 0.46
KDM4E B2RXH2 3/20 0.44
ALDH1A1 P00352 2/20 0.44
HPGD P15428 2/20 0.44
RAB9A P51151 2/20 0.44
HTT P42858 1/20 0.44
IDO1 P14902 1/20 0.43
TDO2 P48775 1/20 0.43
MMP12 P39900 1/20 0.42
PRKCI P41743 1/20 0.41
CYP3A4 P08684 1/20 0.41
NAMPT P43490 1/20 0.41
XDH P47989 1/20 0.41
CTNNB1 P35222 1/20 0.41

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
Benzimidazole SCHEMBL989345 0.92 ALOX12 (0.46) SMN1; SMN2PARP1PDPK1CA12ALOX15
Benzimidazole SCHEMBL990184 0.92 ALOX12 (0.46) SMN1; SMN2PARP1PDPK1CA12ALOX15
Benzimidazole SCHEMBL1128586 0.89 ALOX5AP (0.44) SMN1; SMN2PARP1PDPK1CA12ALOX15
Benzimidazole SCHEMBL28290589 0.88 MMP12 (0.42) SMN1; SMN2PARP1PDPK1CA12ALOX15
Benzimidazole SCHEMBL29439119 0.88 SMN1; SMN2 (0.47) SMN1; SMN2PARP1PDPK1CA12ALOX15
Benzimidazole SCHEMBL11103578 0.88 SMN1; SMN2 (0.47) SMN1; SMN2PARP1PDPK1CA12ALOX15
Benzimidazole SCHEMBL28802233 0.88 SMN1; SMN2 (0.47) SMN1; SMN2PARP1PDPK1CA12ALOX15
Benzimidazole SCHEMBL28557779 0.88 SMN1; SMN2 (0.46) SMN1; SMN2PARP1PDPK1CA12ALOX15
Benzimidazole SCHEMBL11103574 0.88 SMN1; SMN2 (0.47) SMN1; SMN2PARP1PDPK1CA12ALOX15
Benzimidazole SCHEMBL516853 0.88 SMN1; SMN2 (0.46) SMN1; SMN2PARP1PDPK1CA12ALOX15

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 4 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-11174246-B2 Direct AMPK activators RIGEL PHARMACEUTICALS, INC. (US) 2021-11-16 US disclosed
EP-3500558-A1 BENZIMIDAZOLE DIRECT AMPK ACTIVATORS Rigel Pharmaceuticals, Inc. (US) 2019-06-26 EP disclosed
US-20180051006-A1 DIRECT AMPK ACTIVATORS MIDCAP FINANCIAL TRUST 2018-02-22 US disclosed
WO-2018035128-A1 BENZIMIDAZOLE DIRECT AMPK ACTIVATORS RIGEL PHARMACEUTICALS, INC. (US) 2018-02-22 WO disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (2 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-11174246-B2 Direct AMPK activators PRKAA1, PRKAG1, PRKAB1 SMN1; SMN2 2477/4885PARP1 344/4885PDPK1 210/4885
US-20180051006-A1 DIRECT AMPK ACTIVATORS PRKAA1, PRKAG1, PRKAB1 SMN1; SMN2 2477/4885PARP1 344/4885PDPK1 210/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.