SCHEMBL4066232

SCHEMBL4066232

COc1cnc2c(c1)CCCC2NCc1ccc(CNCc2ccccn2)cc1

nearest known ligand 0.44

Predicted protein targets (top 16)

geneUniProtsupporting neighboursconfidence
HDAC1 Q13547 1/20 0.44
HDAC6 Q9UBN7 1/20 0.44
KMT2A Q03164 5/20 0.42
L3MBTL1 Q9Y468 5/20 0.42
MEN1 O00255 3/20 0.42
CXCR4 P61073 5/20 0.41
CYP3A4 P08684 1/20 0.41
CYP2D6 P10635 1/20 0.41
PKM P14618 1/20 0.41
ALOX15 P16050 1/20 0.40
TP53 P04637 1/20 0.40
KDM4E B2RXH2 2/20 0.39
ALDH1A1 P00352 2/20 0.39
LMNA P02545 1/20 0.39
SMN1; SMN2 Q16637 1/20 0.39
HTT P42858 1/20 0.39

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
Bromide SCHEMBL5140827 0.99 HDAC1 (0.43) HDAC1HDAC6KMT2AL3MBTL1MEN1
SCHEMBL29823139 0.83 HDAC1 (0.62) HDAC1HDAC6L3MBTL1CXCR4CYP3A4
SCHEMBL1882612 0.83 HDAC1 (0.62) HDAC1HDAC6L3MBTL1CXCR4CYP3A4
Bromide SCHEMBL4543315 0.82 HDAC1 (0.61) HDAC1HDAC6L3MBTL1CXCR4CYP3A4
SCHEMBL1882131 0.81 HDAC1 (0.59) HDAC1HDAC6KMT2AL3MBTL1MEN1
SCHEMBL29823178 0.81 HDAC1 (0.59) HDAC1HDAC6KMT2AL3MBTL1MEN1
SCHEMBL4069323 0.81 TSHR (0.42) HDAC1HDAC6KMT2AMEN1CXCR4
Bromide SCHEMBL4550638 0.80 HDAC1 (0.58) HDAC1HDAC6KMT2AL3MBTL1MEN1
SCHEMBL4066721 0.79 L3MBTL1 (0.45) HDAC1HDAC6KMT2AL3MBTL1MEN1
Bromide SCHEMBL5140979 0.78 L3MBTL1 (0.45) HDAC1HDAC6KMT2AL3MBTL1MEN1

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 11 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
EP-1317445-B1 CHEMOKINE RECEPTOR BINDING HETEROCYCLIC COMPOUNDS ANORMED INC (CA) 2009-03-11 EP claimed
EP-1317445-B1 CHEMOKINE RECEPTOR BINDING HETEROCYCLIC COMPOUNDS ANORMED INC (CA) 2009-03-11 EP disclosed
US-7396840-B2 Chemokine receptor binding heterocyclic compounds GENZYME CORPORATION (US) 2008-07-08 US disclosed
US-7396840-B2 Chemokine receptor binding heterocyclic compounds GENZYME CORPORATION (US) 2008-07-08 US disclosed
US-7084155-B2 Chemokine receptor binding heterocyclic compounds ANORMED (CA) 2006-08-01 US disclosed
US-20060128750-A1 Chemokine receptor binding heterocyclic compounds GENZYME CORPORATION 2006-06-15 US disclosed
US-6864265-B2 Chemokine receptor binding heterocyclic compounds ANORMED, INC. (CA) 2005-03-08 US disclosed
US-20040220207-A1 Chemokine receptor binding heterocyclic compounds GENZYME CORPORATION 2004-11-04 US disclosed
EP-1317445-A2 CHEMOKINE RECEPTOR BINDING HETEROCYCLIC COMPOUNDS ANORMED INC. (CA) 2003-06-11 EP disclosed
US-20030018046-A1 Chemokine receptor binding heterocyclic compounds GENZYME CORPORATION 2003-01-23 US disclosed
WO-2002022600-A2 CHEMOKINE RECEPTOR BINDING HETEROCYCLIC COMPOUNDS ANORMED INC. (CA) 2002-03-21 WO disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (3 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20040220207-A1 Chemokine receptor binding heterocyclic compounds CXCR3, ACKR3, CCR2 HDAC1 1111/4885HDAC6 805/4885KMT2A 4522/4885
US-20060128750-A1 Chemokine receptor binding heterocyclic compounds CXCR4, CCR5, CXCR3 HDAC1 845/4885HDAC6 828/4885KMT2A 4512/4885
US-20030018046-A1 Chemokine receptor binding heterocyclic compounds CXCR3, ACKR3, CCR2 HDAC1 1111/4885HDAC6 805/4885KMT2A 4522/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.