Benzimidazole

Benzimidazole

SCHEMBL4371075

NC(N)=O.c1ccc2[nH]cnc2c1.c1ccc2[nH]cnc2c1

nearest known ligand 0.51

Full drug profile on Sugi Atlas →

Predicted protein targets (top 20)

geneUniProtsupporting neighboursconfidence
▸ KDM4E B2RXH2 3/20 0.51
▸ PARP1 P09874 2/20 0.51
▸ SMN1; SMN2 Q16637 2/20 0.51
▸ RAB9A P51151 2/20 0.51
▸ ALDH1A1 P00352 1/20 0.51
▸ HPGD P15428 1/20 0.51
▸ HTT P42858 1/20 0.51
▸ CTNNB1 P35222 2/20 0.47
▸ WNT3A P56704 2/20 0.47
▸ PDPK1 O15530 1/20 0.46
▸ CA12 O43570 1/20 0.46
▸ ALOX15 P16050 1/20 0.46
▸ CA9 Q16790 1/20 0.46
▸ TNKS2 Q9H2K2 1/20 0.46
▸ PRKCI P41743 1/20 0.46
▸ HDAC6 Q9UBN7 1/20 0.45
▸ MAPT P10636 1/20 0.44
▸ RAD52 P43351 1/20 0.44
▸ QPCT Q16769 1/20 0.44
▸ QPCTL Q9NXS2 1/20 0.44

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
Benzimidazole SCHEMBL5070094 1.00 KDM4E (0.51) KDM4EPARP1SMN1; SMN2RAB9AALDH1A1
Benzimidazole SCHEMBL158526 0.94 SMN1; SMN2 (0.54) KDM4EPARP1SMN1; SMN2RAB9AALDH1A1
Benzimidazole SCHEMBL9028632 0.92 SMN1; SMN2 (0.49) KDM4EPARP1SMN1; SMN2RAB9AALDH1A1
Benzimidazole SCHEMBL10531809 0.92 KDM4E (0.49) KDM4EPARP1SMN1; SMN2RAB9AALDH1A1
Benzimidazole SCHEMBL16516335 0.90 SMN1; SMN2 (0.57) KDM4EPARP1SMN1; SMN2RAB9AALDH1A1
Benzimidazole SCHEMBL8901469 0.90 SMN1; SMN2 (0.57) KDM4EPARP1SMN1; SMN2RAB9AALDH1A1
Benzimidazole SCHEMBL2334176 0.90 PRKCI (0.50) KDM4EPARP1SMN1; SMN2RAB9AALDH1A1
Benzimidazole SCHEMBL11810774 0.89 KDM4E (0.46) KDM4EPARP1SMN1; SMN2RAB9AALDH1A1
Terephthalamide SCHEMBL29216571 0.89 PARP1 (0.54) KDM4EPARP1SMN1; SMN2RAB9AALDH1A1
Benzimidazole SCHEMBL4306997 0.89 CTNNB1 (0.47) KDM4EPARP1SMN1; SMN2RAB9AALDH1A1

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 5 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-7622592-B2 Carbonylamino-benzimidazole derivatives as androgen receptor modulators MERCK & CO., INC. (US) 2009-11-24 — — US disclosed
EP-1581217-A4 CARBONYLAMINO-BENZIMIDAZOLE DERIVATIVES AS ANDROGEN RECEPTOR MODULATORS MERCK & CO INC (US) 2007-07-11 — — EP disclosed
US-20060036098-A1 Carbonylamino-benzimidazole derivatives as androgen receptor modulators MERCK SHARP & DOHME CORP. 2006-02-16 — — US disclosed
EP-1581217-A1 CARBONYLAMINO-BENZIMIDAZOLE DERIVATIVES AS ANDROGEN RECEPTOR MODULATORS Merck & Co., Inc. (US) 2005-10-05 — — EP disclosed
WO-2004041277-A1 CARBONYLAMINO-BENZIMIDAZOLE DERIVATIVES AS ANDROGEN RECEPTOR MODULATORS MERCK & CO., INC. (US) 2004-05-21 — — WO disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (1 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20060036098-A1 Carbonylamino-benzimidazole derivatives as androgen receptor modulators AR, SHBG, BRCA1 KDM4E 825/4885PARP1 77/4885SMN1; SMN2 2413/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.

Send feedback