Trifluoroacetic Acid

Trifluoroacetic Acid

SCHEMBL5540177

CCCCCCCCN(CCCCCCCC)CCCNCCCCNCCCN.O=C(O)C(F)(F)F.O=C(O)C(F)(F)F.O=C(O)C(F)(F)F.O=C(O)C(F)(F)F

nearest known ligand 0.50

Full drug profile on Sugi Atlas →

Predicted protein targets (top 12)

geneUniProtsupporting neighboursconfidence
HDAC6 Q9UBN7 1/20 0.50
PAOX Q6QHF9 2/20 0.43
EPHX1 P07099 1/20 0.43
RELA Q04206 4/20 0.43
S1PR1 P21453 4/20 0.40
S1PR3 Q99500 4/20 0.40
S1PR2 O95136 3/20 0.40
S1PR5 Q9H228 3/20 0.40
TDP1 Q9NUW8 1/20 0.40
KDM5A P29375 2/20 0.40
PHF8 Q9UPP1 2/20 0.40
KDM4C Q9H3R0 1/20 0.40

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
Trifluoroacetic Acid SCHEMBL1274109 0.90 SLC6A5 (0.50) HDAC6
Trifluoroacetic Acid SCHEMBL1273878 0.90 SLC6A5 (0.50) HDAC6
Trifluoroacetic Acid SCHEMBL8501095 0.88 HDAC6 (0.58) HDAC6PAOXEPHX1RELAS1PR1
SCHEMBL6843614 0.85 TDP1 (0.53) RELATDP1
Trifluoroacetic Acid SCHEMBL3086371 0.84 FAAH (0.43) EPHX1KDM5APHF8KDM4C
Hydrochloric Acid SCHEMBL5540229 0.83 UBE2N (0.52) RELATDP1
SCHEMBL11315437 0.83 TDP1 (0.55) EPHX1RELATDP1
SCHEMBL11332828 0.83 TDP1 (0.55) EPHX1RELATDP1
SCHEMBL27853903 0.82 TDP1 (0.53) EPHX1RELATDP1
SCHEMBL8504211 0.82 RELA (0.50) RELATDP1

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 6 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-7202227-B2 Multifunctional molecular complexes for gene transfer to cells WYETH (US) 2007-04-10 US disclosed
US-20050239204-A1 Multifunctional molecular complexes for gene transfer to cells WYETH (US) 2005-10-27 US disclosed
EP-0789708-B1 MULTIFUNCTIONAL MOLECULAR COMPLEXES FOR GENE TRANSFER TO CELLS WYETH CORP (US) 2004-11-03 EP disclosed
US-20040214328-A9 Multifunctional molecular complexes for gene transfer to cells AMERICAN HOME PRODUCTS CORPORATION (US) 2004-10-28 US disclosed
US-20020155607-A1 Multifunctional molecular complexes for gene transfer to cells AMERICAN HOME PRODUCTS CORPORATION (US) 2002-10-24 US disclosed
US-6379965-B1 NUCLEIC ACID NONCOVALENTLY ASSOCIATED WITH A POLYAMINE COMPOUND THAT IS COVALENTLY ATTACHED TO AN ENDOSOME DISRUPTING AGENT SUCH AS CHOLIC ACID; NONVIRAL VECTORS AMERICAN HOME PRODUCTS CORPORATION 2002-04-30 US disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (2 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20040214328-A9 Multifunctional molecular complexes for gene transfer to cells SNRPE, TARBP1, HNRNPH3 HDAC6 2504/4885PAOX 3374/4885EPHX1 4423/4885
US-20020155607-A1 Multifunctional molecular complexes for gene transfer to cells SNRPE, TARBP1, HNRNPH3 HDAC6 2504/4885PAOX 3374/4885EPHX1 4423/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.