Trifluoroacetic Acid

Trifluoroacetic Acid

SCHEMBL6287789

NCCCC[C@@H](NC(=O)c1ccccc1)C(=O)Nc1ccc(C(c2ccc(NC(=O)[C@@H](CCCCN)NC(=O)c3ccccc3)cc2)c2ccc(NC(=O)[C@@H](CCCCN)NC(=O)c3ccccc3)cc2)cc1.O=C(O)C(F)(F)F

nearest known ligand 0.50

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Predicted protein targets (top 20)

geneUniProtsupporting neighboursconfidence
HDAC4 P56524 5/20 0.50
MEF2D Q14814 2/20 0.50
PLG P00747 1/20 0.50
PADI1 Q9ULC6 3/20 0.48
PADI4 Q9UM07 3/20 0.48
PADI2 Q9Y2J8 2/20 0.48
CA12 O43570 2/20 0.47
CA1 P00915 2/20 0.47
CA9 Q16790 2/20 0.47
CA2 P00918 1/20 0.47
HDAC1 Q13547 5/20 0.47
HDAC3 O15379 3/20 0.47
HDAC7 Q8WUI4 3/20 0.47
HDAC2 Q92769 3/20 0.47
HDAC10 Q969S8 3/20 0.47
HDAC11 Q96DB2 3/20 0.47
HDAC8 Q9BY41 3/20 0.47
HDAC6 Q9UBN7 3/20 0.47
HDAC9 Q9UKV0 3/20 0.47
HDAC5 Q9UQL6 3/20 0.47

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
Trifluoroacetic Acid SCHEMBL6290915 1.00 HDAC4 (0.50) HDAC4MEF2DPLGPADI1PADI4
Trifluoroacetic Acid SCHEMBL6282751 0.90 HPGDS (0.48) HDAC4MEF2DPLGCA12CA1
Trifluoroacetic Acid SCHEMBL6287713 0.88 PLG (0.43) HDAC4MEF2DPLGPADI1PADI4
Trifluoroacetic Acid SCHEMBL6286278 0.86 CALCRL (0.47) HDAC4PLGHDAC1HDAC3HDAC7
Trifluoroacetic Acid SCHEMBL6288016 0.86 CALCRL (0.47) HDAC4PLGHDAC1HDAC3HDAC7
Trifluoroacetic Acid SCHEMBL6286322 0.86 MCHR1 (0.46) HDAC4MEF2DPLGPADI1PADI4
SCHEMBL6287798 0.83 HDAC4 (0.48) HDAC4MEF2DPLGPADI1PADI4
SCHEMBL6290920 0.83 HDAC4 (0.48) HDAC4MEF2DPLGPADI1PADI4
Trifluoroacetic Acid SCHEMBL6287882 0.82 PYGL (0.39) HDAC4PLGPADI1PADI4PADI2
Trifluoroacetic Acid SCHEMBL6286376 0.81 CALCRL (0.46) HDAC4MEF2DPLGCA1CA2

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 6 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-6887890-B2 Compounds exhibiting thrombopoietin-like activities CHUGAI SEIYAKU KABUSHIKI KAISHA (JP) 2005-05-03 US claimed
US-20030162724-A1 Compounds exhibiting thrombopoietin-like activities CHUGAI SEIYAKU KABUSHIKI KAISHA (JP) 2003-08-28 US claimed
EP-1291341-A1 COMPOUNDS EXHIBITING THROMBOPOIETIN-LIKE ACTIVITIES CHUGAI SEIYAKU KABUSHIKI KAISHA (JP) 2003-03-12 EP claimed
US-6887890-B2 Compounds exhibiting thrombopoietin-like activities CHUGAI SEIYAKU KABUSHIKI KAISHA (JP) 2005-05-03 US disclosed
US-20030162724-A1 Compounds exhibiting thrombopoietin-like activities CHUGAI SEIYAKU KABUSHIKI KAISHA (JP) 2003-08-28 US disclosed
EP-1291341-A1 COMPOUNDS EXHIBITING THROMBOPOIETIN-LIKE ACTIVITIES CHUGAI SEIYAKU KABUSHIKI KAISHA (JP) 2003-03-12 EP disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (1 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20030162724-A1 Compounds exhibiting thrombopoietin-like activities MPL, THPO, TEK HDAC4 4652/4885MEF2D 2563/4885PLG 718/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.