SCHEMBL6407399

SCHEMBL6407399

COc1ccc(C=O)cc1C1CCCC1

nearest known ligand 0.56

Predicted protein targets (top 20)

geneUniProtsupporting neighboursconfidence
ALDH1A1 P00352 6/20 0.56
TSHR P16473 1/20 0.56
AOX1 Q06278 1/20 0.51
FDPS P14324 1/20 0.49
ALDH1A3 P47895 1/20 0.48
TRIM24 O15164 1/20 0.47
HPGD P15428 1/20 0.47
ALDH5A1 P51649 1/20 0.47
ABAT P80404 1/20 0.47
TDP1 Q9NUW8 1/20 0.47
TRIM33 Q9UPN9 1/20 0.47
TTR P02766 1/20 0.45
PTGDR2 Q9Y5Y4 2/20 0.44
HTR2A P28223 2/20 0.43
KDM4E B2RXH2 1/20 0.43
NPSR1 Q6W5P4 2/20 0.42
NPC1 O15118 1/20 0.41
SMN1; SMN2 Q16637 3/20 0.40
LMNA P02545 1/20 0.40
MAPT P10636 1/20 0.40

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL6405527 0.98 ALDH1A1 (0.54) ALDH1A1TSHRAOX1FDPSALDH1A3
SCHEMBL24028149 0.86 HTR2C (0.56) ALDH1A1TSHRAOX1FDPSALDH1A3
SCHEMBL8004939 0.86 ALDH1A1 (0.42) ALDH1A1TSHRAOX1FDPSALDH1A3
SCHEMBL25577453 0.81 ALDH1A1 (0.53) ALDH1A1TSHRAOX1FDPSALDH1A3
SCHEMBL16930197 0.80 ALDH1A1 (0.59) ALDH1A1TSHRAOX1FDPSALDH1A3
SCHEMBL3925300 0.80 PTGDR2 (0.39) ALDH1A1TSHRAOX1FDPSALDH1A3
SCHEMBL13262574 0.80 PTGDR2 (0.46) ALDH1A1FDPSTDP1PTGDR2NPSR1
SCHEMBL7262913 0.79 ALDH1A1 (0.36) ALDH1A1TSHRAOX1FDPSALDH1A3
SCHEMBL7674265 0.77 ALDH1A1 (0.51) ALDH1A1TSHRAOX1FDPSALDH1A3
SCHEMBL16956951 0.77 TRPA1 (0.50) ALDH1A1TSHRAOX1TDP1HTR2A

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 8 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-6855730-B2 3-methylidenyl-2-indolinone modulators of protein kinase SUGEN, INC. (US) 2005-02-15 US disclosed
US-6689806-B1 MODULATING PROTEIN KINASES AND RELATED SIGNAL TRANSDUCTION PATHWAYS SUGEN, INC. 2004-02-10 US disclosed
US-20040024010-A1 3-methylidenyl-2-indolinone modulators of protein kinase SUGEN, INC. 2004-02-05 US disclosed
US-6531502-B1 Antitumor SUGEN, INC. 2003-03-11 US disclosed
EP-1165513-A1 INDOLINONE COMPOUNDS AS KINASE INHIBITORS Sugen, Inc. (US) 2002-01-02 EP disclosed
WO-2000056709-A1 INDOLINONE COMPOUNDS AS KINASE INHIBITORS SUGEN, INC. (US) 2000-09-28 WO disclosed
WO-2000008202-A9 3-METHYLIDENYL-2-INDOLINONE MODULATORS OF PROTEIN KINASE SUGEN INC (US) 2000-07-27 WO disclosed
WO-2000008202-A2 3-METHYLIDENYL-2-INDOLINONE MODULATORS OF PROTEIN KINASE SUGEN, INC. (US) 2000-02-17 WO disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (1 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20040024010-A1 3-methylidenyl-2-indolinone modulators of protein kinase DMPK, MAP4K3, MAP3K20 ALDH1A1 2196/4885TSHR 3160/4885AOX1 4310/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.