Pyrimidine

Pyrimidine

SCHEMBL1880807

O=P(O)(O)O.c1cc[nH]c1.c1cncnc1

nearest known ligand 0.35

Full drug profile on Sugi Atlas →

Known targets — ChEMBL curated mechanism

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

The experimentally established mechanism targets of Pyrimidine. The predicted profile below is derived independently by chemical similarity — agreement is a validation signal, a miss is honest.

Predicted protein targets (top 8)

geneUniProtsupporting neighboursconfidence
FDPS P14324 10/20 0.35
BTN3A1 O00481 1/20 0.35
PDE3A Q14432 1/20 0.35
ALPL P05186 1/20 0.30
ALPI P09923 1/20 0.30
ALPG P10696 1/20 0.30
HTT P42858 1/20 0.30
SMN1; SMN2 Q16637 1/20 0.30

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
Pyrimidine SCHEMBL988740 0.84 FDPS (0.34) FDPSBTN3A1PDE3AALPLALPI
Pyrimidine SCHEMBL82718 0.84 ALDH1A1 (0.33)
Pyrimidine SCHEMBL4140222 0.84 FDPS (0.34) FDPSBTN3A1PDE3AALPLALPI
Pyrimidine SCHEMBL4154828 0.84 FDPS (0.34) FDPSBTN3A1PDE3AALPLALPI
Pyrimidine SCHEMBL454436 0.84 FDPS (0.34) FDPSBTN3A1PDE3AALPLALPI
Triphosphate SCHEMBL153616 0.84 FDPS (0.32) FDPSBTN3A1PDE3A
Phosphoric Acid SCHEMBL28225763 0.82 FDPS (0.34) FDPS
Pyrimidine SCHEMBL28436619 0.82 FDPS (0.33) FDPSBTN3A1PDE3AALPLALPI
Phosphoric Acid SCHEMBL9382169 0.82 FDPS (0.37) FDPS
Phosphoric Acid SCHEMBL31619053 0.82 FDPS (0.37) FDPS

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 21 patents — showing the first 20. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
EP-1624059-A2 Method of producing nucleic acid molecules with reduced secondary structure Agilent Technologies, Inc. (US) 2006-02-08 EP claimed
US-20040086880-A1 Method of producing nucleic acid molecules with reduced secondary structure AGILENT TECHNOLOGIES, INC. 2004-05-06 US claimed
US-20250109449-A1 HIGH THROUGHPUT NUCLEIC ACID SEQUENCING BY EXPANSION ROCHE SEQUENCING SOLUTIONS INC (US) 2025-04-03 US disclosed
EP-2952587-B1 HIGH THROUGHPUT NUCLEIC ACID SEQUENCING BY EXPANSION STRATOS GENOMICS INC (US) 2023-07-05 EP disclosed
US-20220064741-A1 HIGH THROUGHPUT NUCLEIC ACID SEQUENCING BY EXPANSION Roche Sequencing Solutions, Inc. 2022-03-03 US disclosed
US-20180334729-A1 HIGH THROUGHPUT NUCLEIC ACID SEQUENCING BY EXPANSION Roche Sequencing Solutions, Inc. 2018-11-22 US disclosed
US-9920386-B2 High throughput nucleic acid sequencing by expansion STRATOS GENOMICS, INC. (US) 2018-03-20 US disclosed
US-20160208344-A1 HIGH THROUGHPUT NUCLEIC ACID SEQUENCING BY EXPANSION Roche Sequencing Solutions, Inc. 2016-07-21 US disclosed
EP-2952587-A1 HIGH THROUGHPUT NUCLEIC ACID SEQUENCING BY EXPANSION Stratos Genomics Inc. (US) 2015-12-09 EP disclosed
EP-2171088-B1 HIGH THROUGHPUT NUCLEIC ACID SEQUENCING BY EXPANSION STRATOS GENOMICS INC (US) 2015-10-14 EP disclosed
US-20130172197-A1 HIGH THROUGHPUT NUCLEIC ACID SEQUENCING BY EXPANSION STRATOS GENOMICS, INC. (US) 2013-07-04 US disclosed
US-8324360-B2 High throughput nucleic acid sequencing by expansion STRATOS GENOMICS, INC. (US) 2012-12-04 US disclosed
US-20110251079-A1 HIGH THROUGHPUT NUCLEIC ACID SEQUENCING BY EXPANSION STRATOS GENOMICS, INC. (US) 2011-10-13 US disclosed
US-20110237787-A1 HIGH THROUGHPUT NUCLEIC ACID SEQUENCING BY EXPANSION STRATOS GENOMICS, INC. (US) 2011-09-29 US disclosed
US-7939259-B2 High throughput nucleic acid sequencing by expansion STRATOS GENOMICS, INC. (US) 2011-05-10 US disclosed
EP-2171088-A2 HIGH THROUGHPUT NUCLEIC ACID SEQUENCING BY EXPANSION Stratos Genomics Inc. (US) 2010-04-07 EP disclosed
US-20090035777-A1 HIGH THROUGHPUT NUCLEIC ACID SEQUENCING BY EXPANSION Roche Sequencing Solutions, Inc. 2009-02-05 US disclosed
WO-2008157696-A2 HIGH THROUGHPUT NUCLEIC ACID SEQUENCING BY EXPANSION STRATOS GENOMICS INC. (US) 2008-12-24 WO disclosed
EP-1624059-A2 Method of producing nucleic acid molecules with reduced secondary structure Agilent Technologies, Inc. (US) 2006-02-08 EP disclosed
US-20040086880-A1 Method of producing nucleic acid molecules with reduced secondary structure AGILENT TECHNOLOGIES, INC. 2004-05-06 US disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (3 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20250109449-A1 HIGH THROUGHPUT NUCLEIC ACID SEQUENCING BY EXPANSION ERCC4, NUDT21, XPNPEP1 FDPS 1897/4885BTN3A1 2074/4885PDE3A 4824/4885
US-20090035777-A1 HIGH THROUGHPUT NUCLEIC ACID SEQUENCING BY EXPANSION ERCC4, NUDT21, CPSF6 FDPS 1804/4885BTN3A1 2148/4885PDE3A 4867/4885
US-20110237787-A1 HIGH THROUGHPUT NUCLEIC ACID SEQUENCING BY EXPANSION ERCC4, NUDT21, CPSF6 FDPS 1804/4885BTN3A1 2148/4885PDE3A 4867/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.