Glyphosate

Glyphosate

SCHEMBL2293917

NCCN.O=C(O)CNCP(=O)(O)O

nearest known ligand 0.83

Full drug profile on Sugi Atlas →

Known targets — ChEMBL curated mechanism

ADORA1ADORA2AADORA2BADORA3PDE3APDE3BPDE4APDE4BPDE4CPDE4D

The experimentally established mechanism targets of Glyphosate. The predicted profile below is derived independently by chemical similarity — agreement is a validation signal, a miss is honest.

Predicted protein targets (top 20)

geneUniProtsupporting neighboursconfidence
▸ PDE4D known ✓ Q08499 1/20 0.32
▸ PDE3A known ✓ Q14432 1/20 0.32
▸ LMNA P02545 5/20 0.37
▸ BLM P54132 4/20 0.37
▸ KMT2A Q03164 3/20 0.37
▸ TSHR P16473 2/20 0.37
▸ MEN1 O00255 2/20 0.37
▸ ALDH1A1 P00352 2/20 0.37
▸ HPGD P15428 1/20 0.37
▸ TDP1 Q9NUW8 1/20 0.37
▸ THRB P10828 2/20 0.36
▸ NPSR1 Q6W5P4 2/20 0.36
▸ GABRR3 A8MPY1 1/20 0.36
▸ GABRP O00591 1/20 0.36
▸ GABRD O14764 1/20 0.36
▸ HDAC3 O15379 1/20 0.36
▸ GABBR2 O75899 1/20 0.36
▸ CYP1A2 P05177 1/20 0.36
▸ GABRA1 P14867 1/20 0.36
▸ GABRB1 P18505 1/20 0.36

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
Glyphosate SCHEMBL465980 0.92 LMNA (0.34) LMNABLMKMT2ATSHRMEN1
Glyphosate SCHEMBL612618 0.91 GLRA1 (0.43) LMNABLMKMT2ATSHRMEN1
Glyphosate SCHEMBL6056320 0.91 MEN1 (0.40) LMNABLMKMT2ATSHRMEN1
Glyphosate SCHEMBL29694166 0.91 LMNA (0.43) LMNABLMKMT2ATSHRMEN1
Glyphosate SCHEMBL1964442 0.91 LMNA (0.43) LMNABLMKMT2ATSHRMEN1
Glyphosate SCHEMBL30579951 0.91 LMNA (0.43) LMNABLMKMT2ATSHRMEN1
Glyphosate SCHEMBL16440 0.91 LMNA (0.43) LMNABLMKMT2ATSHRMEN1
Glyphosate SCHEMBL30579950 0.91 LMNA (0.43) LMNABLMKMT2ATSHRMEN1
Glyphosate SCHEMBL214438 0.91 LMNA (0.43) LMNABLMKMT2ATSHRMEN1
Glyphosate SCHEMBL8515704 0.91 LMNA (0.43) LMNABLMKMT2ATSHRMEN1

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 12 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-7989392-B2 Herbicidal compositions containing glyphosate bipyridilium MONSANTO TECHNOLOGY, LLC (US) 2011-08-02 — — US claimed
EP-1343375-B1 AQUEOUS PESTICIDE FORMULATIONS AND NOVEL SURFACTANTS MONSANTO TECHNOLOGY LLC (US) 2006-08-02 — — EP claimed
US-20060148648-A1 Herbicidal compositions containing glyphosate bipyridilium MONSANTO TECHNOLOGY LLC 2006-07-06 — — US claimed
US-7049270-B2 Potassium glyphosate formulations MONSANTO TECHNOLOGY LLC (US) 2006-05-23 — — US claimed
EP-1343375-A2 AQUEOUS PESTICIDE FORMULATIONS AND NOVEL SURFACTANTS Monsanto Technology LLC (US) 2003-09-17 — — EP claimed
US-20030104943-A1 Novel surfactants and formulations MONSANTO TECHNOLOGY LLC 2003-06-05 — — US claimed
WO-2002021924-A2 HERBICIDAL COMPOSITIONS CONTAINING GLYPHOSATE AND BIPYRIDILIUM MONSANTO TECHNOLOGY LLC (US) 2002-03-21 — — WO claimed
WO-2001089302-A2 AQUEOUS PESTICIDE FORMULATIONS AND NOVEL SURFACTANTS MONSANTO TECHNOLOGY, LLC (US) 2001-11-29 — — WO claimed
US-20060265780-A1 Interaction of glyphosate with photosystem II inhibitor herbicides as a selection tool for roundup ready events MONSANTO TECHNOLOGY LLC (US) 2006-11-23 — — US disclosed
WO-2002012165-A1 (POLY)ETHEREAL AMMONIUM SALTS OF HERBICIDES BEARING ACIDIC MOIETIES AND THEIR USE AS HERBICIDES ISHIHARA SANGYO KAISHA , LTD. (JP) 2002-02-14 — — WO disclosed
US-6300323-B1 ACIDIC HERBICIDES ISHIHARA SANGYO KAISHA, LTD. (JP) 2001-10-09 — — US disclosed
US-4159901-A AMINOMETHYLENEPHOSPHONIC ACID, THIOL MONSANTO COMPANY (US) 1979-07-03 — — US disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (2 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20060148648-A1 Herbicidal compositions containing glyphosate bipyridilium SYMPK, PTMS, GLO1 PDE4D 1836/4885PDE3A 948/4885LMNA 3280/4885
US-20030104943-A1 Novel surfactants and formulations PHOSPHO1, GNMT, DDT PDE4D 747/4885PDE3A 854/4885LMNA 1966/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.

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