SCHEMBL3335064

SCHEMBL3335064

Cc1cccc(-c2nc3ccccc3[nH]2)c1

nearest known ligand 0.67

Predicted protein targets (top 20)

geneUniProtsupporting neighboursconfidence
▸ NPC1 O15118 10/20 0.67
▸ RAB9A P51151 10/20 0.67
▸ SMN1; SMN2 Q16637 9/20 0.67
▸ ALDH1A1 P00352 9/20 0.67
▸ KDM4E B2RXH2 9/20 0.67
▸ HPGD P15428 5/20 0.67
▸ TP53 P04637 3/20 0.67
▸ HSD17B10 Q99714 3/20 0.67
▸ GAA P10253 1/20 0.66
▸ NR1I3 Q14994 1/20 0.64
▸ MEN1 O00255 2/20 0.63
▸ KMT2A Q03164 2/20 0.63
▸ POLB P06746 1/20 0.63
▸ PKM P14618 5/20 0.61
▸ MAPT P10636 4/20 0.61
▸ NFKB1 P19838 1/20 0.61
▸ NFKB2 Q00653 1/20 0.61
▸ RELA Q04206 1/20 0.61
▸ NPBWR1 P48145 1/20 0.60
▸ GFER P55789 1/20 0.60

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL3417301 0.88 NPC1 (0.78) NPC1RAB9ASMN1; SMN2ALDH1A1KDM4E
SCHEMBL21087331 0.87 NPC1 (0.60) NPC1RAB9ASMN1; SMN2ALDH1A1KDM4E
SCHEMBL29906136 0.86 SMN1; SMN2 (0.70) NPC1RAB9ASMN1; SMN2ALDH1A1KDM4E
SCHEMBL28836320 0.86 SMN1; SMN2 (0.70) NPC1RAB9ASMN1; SMN2ALDH1A1KDM4E
SCHEMBL15786288 0.86 SMN1; SMN2 (0.65) NPC1RAB9ASMN1; SMN2ALDH1A1KDM4E
SCHEMBL28027557 0.86 KDM4E (0.75) NPC1RAB9ASMN1; SMN2ALDH1A1KDM4E
SCHEMBL20445365 0.84 NPC1 (0.61) NPC1RAB9ASMN1; SMN2ALDH1A1KDM4E
SCHEMBL17470481 0.83 NPC1 (0.76) NPC1RAB9ASMN1; SMN2ALDH1A1KDM4E
SCHEMBL7279556 0.81 NPC1 (0.52) NPC1RAB9ASMN1; SMN2ALDH1A1KDM4E
SCHEMBL31289459 0.81 NPC1 (0.66) NPC1RAB9ASMN1; SMN2ALDH1A1KDM4E

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 67 patents — showing the first 20. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
WO-2024118936-A1 2-ARYLBENZIMIDAZOLE COMPOUNDS FOR THE TREATMENT OF HEMOGLOBINOPATHIES TRANQUIS THERAPEUTICS, INC. (US) 2024-06-06 — — WO claimed
EP-1663204-A4 C-KIT MODULATORS AND METHODS OF USE EXELIXIS INC (US) 2008-08-13 — — EP claimed
JP-2007504160-A — — 2007-03-01 — — JP claimed
EP-1663204-A2 C-KIT MODULATORS AND METHODS OF USE Exelixis, Inc. (US) 2006-06-07 — — EP claimed
WO-2005020921-A2 C-KIT MODULATORS AND METHODS OF USE EXELIXIS, INC. (US) 2005-03-10 — — WO claimed
US-12403128-B2 Compositions and methods for blocking sodium channels Univerity of Virginia Patent Foundation (US) 2025-09-02 — — US disclosed
US-12195432-B2 2-arylbenzimidazoles as Ppargc1a activators for treating neurodegenerative diseases THE BOARD OF TRUSTEES OF THE LELAND STANFORD JUNIOR UNIVERSITY (US) 2025-01-14 — — US disclosed
WO-2024137505-A2 METHOD OF IMPROVING CELL FITNESS IN AN EX-VIVO CELL POPULATION TRANQUIS THERAPEUTICS, INC. (US) 2024-06-27 — — WO disclosed
WO-2024118936-A1 2-ARYLBENZIMIDAZOLE COMPOUNDS FOR THE TREATMENT OF HEMOGLOBINOPATHIES TRANQUIS THERAPEUTICS, INC. (US) 2024-06-06 — — WO disclosed
US-20230322747-A1 OXADIAZOLE HDAC6 INHIBITORS AND USES THEREOF EIKONIZO THERAPEUTICS, INC. (US) 2023-10-12 — — US disclosed
CN-116635028-A Modulators of c-MYC mRNA translation and their use in the treatment of cancer 艾尼莫生物科技公司 2023-08-22 — — CN disclosed
CN-116574063-A Preparation method of benzimidazole derivative 厦门医学院 2023-08-11 — — CN disclosed
US-20080096892-A1 C-Kit Modulators And Methods Of Use EXELIXIS, INC. (US) 2008-04-24 — — US disclosed
US-6030992-A ANTAGONISTS FOR THE BINDING OF NEUROKININ-2 RECEPTOR; SLEEP DISORDERS; BENZIMIDES, 2- OR 3-ALKOXYBENZIMIDES AND 2,3-DIALKOXYBENZIMIDES ELI LILLY AND COMPANY (US) 2000-02-29 — — US disclosed
US-6025379-A A SUBSTITUTED BENZIMIDAZOLE, TACHYKININ RECEPTOR ANTAGONISTS, ELI LILLY AND COMPANY (US) 2000-02-15 — — US disclosed
WO-1997033873-A1 METHODS OF TREATING OR PREVENTING INTERSTITIAL CYSTITIS ELI LILLY AND COMPANY (US) 1997-09-18 — — WO disclosed
WO-1997031635-A1 METHODS OF TREATING OR PREVENTING SLEEP APNEA ELI LILLY AND COMPANY (US) 1997-09-04 — — WO disclosed
US-5552426-A NERVOUS SYSTEM DISORDERS USING IMIDAZOLE DERIVITIVES ELI LILLY AND COMPANY (US) 1996-09-03 — — US disclosed
EP-0694535-A1 Non-peptidyl tachykinin receptor antagonists ELI LILLY AND COMPANY (US) 1996-01-31 — — EP disclosed
US-3953600-A HYPOLIPIDEMIC AGENTS SANDOZ, INC. (US) 1976-04-27 — — US disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (4 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20080096892-A1 C-Kit Modulators And Methods Of Use KIT, PRKCH, PRKCB NPC1 2020/4885RAB9A 1443/4885SMN1; SMN2 3206/4885
US-20230322747-A1 OXADIAZOLE HDAC6 INHIBITORS AND USES THEREOF HDAC6, HDAC1, HDAC11 NPC1 2177/4885RAB9A 1958/4885SMN1; SMN2 498/4885
US-12403128-B2 Compositions and methods for blocking sodium channels SCN3A, SCN1B, SCN2B NPC1 483/4885RAB9A 2068/4885SMN1; SMN2 228/4885
US-12195432-B2 2-arylbenzimidazoles as Ppargc1a activators for treating neurodegenerative diseases PPARG, PPARA, PPARD NPC1 989/4885RAB9A 2214/4885SMN1; SMN2 39/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.

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