Trifluoroacetic Acid

Trifluoroacetic Acid

SCHEMBL4164232

CN1CCN(CC(=O)N[C@@H](CCCSCC(=O)C(F)(F)F)C(=O)NC2CCCC2)CC1.O=C(O)C(F)(F)F

nearest known ligand 0.43

Full drug profile on Sugi Atlas →

Predicted protein targets (top 12)

geneUniProtsupporting neighboursconfidence
SIGMAR1 Q99720 7/20 0.43
HDAC4 P56524 4/20 0.37
HDAC1 Q13547 4/20 0.37
HDAC6 Q9UBN7 1/20 0.37
KDM4E B2RXH2 1/20 0.36
DPP4 P27487 2/20 0.34
DPP8 Q6V1X1 1/20 0.34
CHRM5 P08912 2/20 0.33
CHRM1 P11229 2/20 0.33
CHRM2 P08172 1/20 0.33
CHRM4 P08173 1/20 0.33
CHRM3 P20309 1/20 0.33

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL4165139 0.79 HDAC1 (0.41) HDAC4HDAC1HDAC6
Trifluoroacetic Acid SCHEMBL4154002 0.75 CYP2C19 (0.48) SIGMAR1
Trifluoroacetic Acid SCHEMBL4606072 0.75 SIGMAR1 (0.52) SIGMAR1
Trifluoroacetic Acid SCHEMBL4164045 0.74 TSHR (0.44) SIGMAR1
SCHEMBL4174424 0.74 SIGMAR1 (0.38) SIGMAR1HDAC4HDAC1HDAC6
Trifluoroacetic Acid SCHEMBL4164236 0.73 CES1 (0.33) SIGMAR1
Trifluoroacetic Acid SCHEMBL4150080 0.72 CES1 (0.43) HDAC1KDM4E
Trifluoroacetic Acid SCHEMBL4161039 0.72 SIGMAR1 (0.57) SIGMAR1CHRM1CHRM2CHRM3
Trifluoroacetic Acid SCHEMBL4159826 0.72 CCR2 (0.49) SIGMAR1
Trifluoroacetic Acid SCHEMBL4622701 0.71 CHRM1 (0.46) SIGMAR1CHRM1

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 3 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-20090054448-A1 Amino Acid Derivatives as Histone Deacetylase (HDAC) Inhibitors JONES PHILIP 2009-02-26 US disclosed
EP-1945609-A2 AMINO ACID DERIVATIVES AS HISTONE DEACETYLASE (HDAC) INHIBITORS ISTITUTO DI RICERCHE DI BIOLOGIA MOLECOLARE P. ANGELETTI S.P.A. (IT) 2008-07-23 EP disclosed
WO-2007029036-A2 AMINO ACID DERIVATIVES AS HISTONE DEACETYLASE (HDAC) INHIBITORS ISTITUTO DI RICERCHE DI BIOLOGIA MOLECOLARE P. ANGELETTI SPA (IT) 2007-03-15 WO disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (1 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20090054448-A1 Amino Acid Derivatives as Histone Deacetylase (HDAC) Inhibitors HDAC5, HDAC1, HDAC11 SIGMAR1 3623/4885HDAC4 4/4885HDAC1 2/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.