Trifluoroacetic Acid

Trifluoroacetic Acid

SCHEMBL504173

O=C(O)C(F)(F)F.O=C(O)CCC(=O)NO

nearest known ligand 0.73

Full drug profile on Sugi Atlas →

Predicted protein targets (top 20)

geneUniProtsupporting neighboursconfidence
FOLH1 Q04609 5/20 0.73
PHF8 Q9UPP1 5/20 0.73
KDM2A Q9Y2K7 5/20 0.73
KDM4E B2RXH2 3/20 0.73
KDM5C P41229 3/20 0.73
EGLN1 Q9GZT9 3/20 0.73
KDM6B O15054 1/20 0.73
ECE1 P42892 1/20 0.43
HDAC3 O15379 3/20 0.42
HDAC1 Q13547 3/20 0.42
HDAC2 Q92769 3/20 0.42
HDAC8 Q9BY41 3/20 0.42
HDAC6 Q9UBN7 3/20 0.42
HDAC5 Q9UQL6 2/20 0.42
LMNA P02545 2/20 0.42
MMP1 P03956 1/20 0.42
ALKBH5 Q6P6C2 1/20 0.41
SUCNR1 Q9BXA5 1/20 0.41
KDM7A Q6ZMT4 1/20 0.40
POLB P06746 1/20 0.39

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL240068 0.85
Trifluoroacetic Acid SCHEMBL27603407 0.83 FOLH1 (0.48) FOLH1PHF8KDM2AKDM4EKDM5C
Succinic Acid SCHEMBL29896406 0.83 LMNA (0.60) FOLH1PHF8KDM2AKDM4EKDM5C
Succinic Acid SCHEMBL29896408 0.83 LMNA (0.60) FOLH1PHF8KDM2AKDM4EKDM5C
Octanedioate SCHEMBL4585405 0.76 FOLH1 (0.80) FOLH1PHF8KDM2AKDM4EKDM5C
Succinic Acid SCHEMBL28172524 0.74 PHF8 (0.76) FOLH1PHF8KDM2AKDM4EKDM5C
Trifluoroacetic Acid SCHEMBL11688514 0.74 CA2 (0.40) FOLH1PHF8KDM2AKDM4EKDM5C
Succinodihydroxamic Acid SCHEMBL940650 0.74 FOLH1 (0.75) FOLH1PHF8KDM2AKDM4EKDM5C
Glutarate SCHEMBL4768243 0.72 SLC22A6 (0.65) FOLH1EGLN1HDAC3HDAC1HDAC2
Trifluoroacetic Acid SCHEMBL28035892 0.72 LDHA (0.60) KDM4EEGLN1LMNAALKBH5SUCNR1

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 3 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-8778626-B2 Clickable cross-linker CALIFORNIA INSTITUTE OF TECHNOLOGY (US) 2014-07-15 US disclosed
US-20120028285-A1 Clickable cross-linker NATIONAL SCIENCE FOUNDATION 2012-02-02 US disclosed
WO-2012006603-A2 CLICKABLE CROSS-LINKER CALIFORNIA INSTITUTE OF TECHNOLOGY (US) 2012-01-12 WO disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (1 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20120028285-A1 Clickable cross-linker MTCL3, SPPL2B, VIP FOLH1 334/4885PHF8 4038/4885KDM2A 3990/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.