SCHEMBL5057520

SCHEMBL5057520

c1cnc2c(c1)CCCC2NCCCCNCc1ncc[nH]1

nearest known ligand 0.46

Predicted protein targets (top 11)

geneUniProtsupporting neighboursconfidence
HDAC1 Q13547 2/20 0.46
HDAC6 Q9UBN7 2/20 0.46
CXCR4 P61073 15/20 0.43
CYP2D6 P10635 11/20 0.43
CYP3A4 P08684 6/20 0.43
SLC40A1 Q9NP59 1/20 0.43
OPRM1 P35372 2/20 0.39
OPRK1 P41145 2/20 0.39
ADRA2A P08913 1/20 0.39
ADRA2C P18825 1/20 0.39
KCNH2 Q12809 1/20 0.39

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL4932583 0.89 HDAC1 (0.56) HDAC1HDAC6CXCR4CYP2D6SLC40A1
SCHEMBL4711584 0.85 HDAC1 (0.47) HDAC1HDAC6CXCR4CYP2D6CYP3A4
SCHEMBL4761648 0.83 SLC40A1 (0.62) CXCR4CYP2D6SLC40A1OPRM1KCNH2
SCHEMBL6886947 0.83 SLC40A1 (0.62) CXCR4CYP2D6SLC40A1OPRM1KCNH2
SCHEMBL5671385 0.83 SLC40A1 (0.62) CXCR4CYP2D6SLC40A1OPRM1KCNH2
SCHEMBL6047459 0.82 HDAC1 (0.41) HDAC1HDAC6CXCR4CYP2D6CYP3A4
SCHEMBL30096620 0.79 HDAC1 (0.55) HDAC1HDAC6CXCR4CYP2D6CYP3A4
SCHEMBL6018137 0.78 HDAC1 (0.53) HDAC1HDAC6CXCR4CYP2D6CYP3A4
SCHEMBL14275061 0.78 HDAC1 (0.51) HDAC1HDAC6CXCR4CYP2D6CYP3A4
SCHEMBL21784360 0.78 HDAC1 (0.51) HDAC1HDAC6CXCR4CYP2D6CYP3A4

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 8 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-20220409589-A1 CHEMOKINE RECEPTOR BINDING HETEROCYCLIC COMPOUNDS WITH ENHANCED EFFICACY GENZYME CORP (US) 2022-12-29 US disclosed
EP-1465889-B1 CHEMOKINE RECEPTOR BINDING HETEROCYCLIC COMPOUNDS WITH ENHANCED EFFICACY GENZYME CORP (US) 2017-03-22 EP disclosed
US-8778967-B2 Chemokine receptor binding heterocyclic compounds with enhanced efficacy GENZYME CORPORATION (US) 2014-07-15 US disclosed
US-20120301427-A1 CHEMOKINE RECEPTOR BINDING HETEROCYCLIC COMPOUNDS WITH ENHANCED EFFICACY GENZYME CORPORATION 2012-11-29 US disclosed
US-20080167341-A1 CHEMOKINE RECEPTOR BINDING HETEROCYCLIC COMPOUNDS WITH ENHANCED EFFICACY GENZYME CORPORATION 2008-07-10 US disclosed
US-7354934-B2 Chemokine receptor binding heterocyclic compounds with enhanced efficacy ANORMED, INC. (CA) 2008-04-08 US disclosed
US-20060100240-A1 Chemokine receptor binding heterocyclic compounds with enhanced efficacy ANORMED CORPORATION (CA) 2006-05-11 US disclosed
US-20030220341-A1 Chemokine receptor binding heterocyclic compounds with enhanced efficacy ANORMED, INC. (CA) 2003-11-27 US disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (5 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20080167341-A1 CHEMOKINE RECEPTOR BINDING HETEROCYCLIC COMPOUNDS WITH ENHANCED EFFICACY CCR5, CXCR4, CXCR3 HDAC1 1094/4885HDAC6 1371/4885CXCR4 2/4885
US-20030220341-A1 Chemokine receptor binding heterocyclic compounds with enhanced efficacy CCR5, CXCR4, CXCR3 HDAC1 1094/4885HDAC6 1371/4885CXCR4 2/4885
US-20060100240-A1 Chemokine receptor binding heterocyclic compounds with enhanced efficacy CCR5, CXCR4, CXCR3 HDAC1 1094/4885HDAC6 1371/4885CXCR4 2/4885
US-20120301427-A1 CHEMOKINE RECEPTOR BINDING HETEROCYCLIC COMPOUNDS WITH ENHANCED EFFICACY CCR5, CXCR4, CXCR3 HDAC1 1111/4885HDAC6 1365/4885CXCR4 2/4885
US-20220409589-A1 CHEMOKINE RECEPTOR BINDING HETEROCYCLIC COMPOUNDS WITH ENHANCED EFFICACY CCR5, CXCR4, CXCR3 HDAC1 1094/4885HDAC6 1371/4885CXCR4 2/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.