SCHEMBL506099

SCHEMBL506099

C[Si](C)(C)n1cnc(N)nc1=O

nearest known ligand 0.39

Predicted protein targets (top 14)

geneUniProtsupporting neighboursconfidence
DNMT1 P26358 2/20 0.39
GMNN O75496 1/20 0.39
ALDH1A1 P00352 1/20 0.39
LMNA P02545 1/20 0.39
TP53 P04637 1/20 0.39
NFKB1 P19838 1/20 0.39
THPO P40225 1/20 0.39
MTOR P42345 1/20 0.39
HTT P42858 1/20 0.39
RAB9A P51151 1/20 0.39
BLM P54132 1/20 0.39
HBB P68871 1/20 0.39
PMP22 Q01453 1/20 0.39
ADRB1 P08588 1/20 0.37

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL17040215 0.71
SCHEMBL1666675 0.70
SCHEMBL12724275 0.69 CDK1 (0.47) DNMT1GMNNALDH1A1LMNATP53
SCHEMBL12702629 0.69 ALDH1A1 (0.44) DNMT1GMNNALDH1A1LMNATP53
SCHEMBL12451367 0.69 CDK1 (0.47) DNMT1GMNNALDH1A1LMNATP53
SCHEMBL5694084 0.68 DNMT1 (0.37) DNMT1GMNNALDH1A1LMNATP53
SCHEMBL28384782 0.67 KDM4E (0.40) ALDH1A1MTOR
SCHEMBL8080123 0.67 LMNA (0.39) ALDH1A1LMNAMTOR
SCHEMBL20402394 0.64 ADORA2A (0.46) DNMT1GMNNALDH1A1LMNATP53
SCHEMBL11052944 0.63 CRHR1 (0.38) ALDH1A1LMNA

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 9 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-20120029181-A1 SYNTHESIS OF 5-AZACYTIDINE PHARMION LLC (US) 2012-02-02 US disclosed
US-8058424-B2 Synthesis of 5-azacytidine PHARMION LLC (US) 2011-11-15 US disclosed
US-20110092694-A1 SYNTHESIS OF 5-AZACYTIDINE PHARMION LLC 2011-04-21 US disclosed
US-7858774-B2 Coupling silylated 5-azacytosine to a protected ribofuranose using trimethylsilyl trifluoromethane catalyst; cooling, accumulation by filtration, quenching, solvent extraction PHARMION LLC (US) 2010-12-28 US disclosed
US-20090005551-A1 SYNTHESIS OF 5-AZACYTIDINE CELGENE INTERNATIONAL SARL (CH) 2009-01-01 US disclosed
US-20060247432-A1 Synthesis of 5-Azacytidine CELGENE INTERNATIONAL SARL (CH) 2006-11-02 US disclosed
US-7038038-B2 Synthesis of 5-azacytidine PHARMION CORPORATION (US) 2006-05-02 US disclosed
WO-2004082618-A2 SYNTHESIS OF 5-AZACYTIDINE ASH STEVENS INC (US) 2004-09-30 WO disclosed
US-20040186283-A1 Synthesis of 5-azacytidine CELGENE INTERNATIONAL SARL (CH) 2004-09-23 US disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (5 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20110092694-A1 SYNTHESIS OF 5-AZACYTIDINE TYMS, DNMT1, TET1 DNMT1 2/4885GMNN 114/4885ALDH1A1 2154/4885
US-20120029181-A1 SYNTHESIS OF 5-AZACYTIDINE TYMS, DNMT1, TET1 DNMT1 2/4885GMNN 114/4885ALDH1A1 2154/4885
US-20060247432-A1 Synthesis of 5-Azacytidine TYMS, DNMT1, TET1 DNMT1 2/4885GMNN 114/4885ALDH1A1 2154/4885
US-20040186283-A1 Synthesis of 5-azacytidine DNMT1, TYMS, TET1 DNMT1 1/4885GMNN 123/4885ALDH1A1 2092/4885
US-20090005551-A1 SYNTHESIS OF 5-AZACYTIDINE TYMS, DNMT1, TET1 DNMT1 2/4885GMNN 114/4885ALDH1A1 2154/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.