SCHEMBL5507719

SCHEMBL5507719

CC(C)[Si]1(C(C)C)OC[C@H]2O[C@@H](n3cnc4c(NC(=O)c5ccccc5)ncnc43)[C@H](OCC[N+]3(O)C(=O)c4ccccc4C3=O)[C@@H]2O[Si](C(C)C)(C(C)C)O1

nearest known ligand 0.42

Predicted protein targets (top 18)

geneUniProtsupporting neighboursconfidence
▸ PRMT6 Q96LA8 1/20 0.41
▸ PDE4A P27815 2/20 0.38
▸ PDE4D Q08499 2/20 0.38
▸ CYP1A2 P05177 1/20 0.38
▸ HTR1A P08908 1/20 0.38
▸ CYP2D6 P10635 1/20 0.38
▸ ADRB3 P13945 1/20 0.38
▸ PTGS2 P35354 1/20 0.38
▸ PDE3A Q14432 1/20 0.38
▸ LMNA P02545 1/20 0.38
▸ SMN1; SMN2 Q16637 1/20 0.38
▸ NPSR1 Q6W5P4 1/20 0.37
▸ RXFP1 Q9HBX9 1/20 0.37
▸ P2RY12 Q9H244 5/20 0.36
▸ PDE4B Q07343 1/20 0.35
▸ PDE4C Q08493 1/20 0.35
▸ ADORA2A P29274 2/20 0.34
▸ ADORA2B P29275 2/20 0.34

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL1595976 0.87 RXFP1 (0.40) LMNANPSR1RXFP1
SCHEMBL19509704 0.87 PRMT6 (0.42) PRMT6PDE4APDE4DCYP1A2HTR1A
SCHEMBL19500434 0.87 PRMT6 (0.42) PRMT6PDE4APDE4DCYP1A2HTR1A
SCHEMBL29772230 0.87 PRMT6 (0.42) PRMT6PDE4APDE4DCYP1A2HTR1A
SCHEMBL29827355 0.86 PRMT6 (0.41) PRMT6PDE4APDE4DCYP1A2HTR1A
SCHEMBL19509703 0.85 PRMT6 (0.38) PRMT6PDE4APDE4DCYP1A2HTR1A
SCHEMBL21652380 0.85 PRMT6 (0.38) PRMT6PDE4APDE4DCYP1A2HTR1A
SCHEMBL19500433 0.85 PRMT6 (0.38) PRMT6PDE4APDE4DCYP1A2HTR1A
SCHEMBL23042726 0.85 PRMT6 (0.43) PRMT6PDE4APDE4DCYP1A2HTR1A
SCHEMBL29772226 0.85 PRMT6 (0.43) PRMT6PDE4APDE4DCYP1A2HTR1A

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 9 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
EP-0977767-B1 AMINOOXY-MODIFIED OLIGONUCLEOTIDES ISIS PHARMACEUTICALS INC (US) 2007-09-19 — — EP disclosed
US-6849723-B2 Oligonucleotide analogs having modified dimers ISIS PHARMACEUTICALS, INC. (US) 2005-02-01 — — US disclosed
US-6639062-B2 Oligonucleotides which elicit ribonuclease for cleavage in complementary nucleic acid strand, having increased binding affinity/nuclease resistance; for medical diagnosis, gene therapy ISIS PHARMACEUTICALS, INC. 2003-10-28 — — US disclosed
US-20030181693-A1 Oligonucleotide analogs having modified dimers COOK PHILLIP DAN (US) 2003-09-25 — — US disclosed
US-20030088079-A1 AMINOOXY-MODIFIED NUCLEOSIDIC COMPOUNDS AND OLIGOMERIC COMPOUNDS PREPARED THEREFROM IONIS PHARMACEUTICALS, INC. 2003-05-08 — — US disclosed
US-6420549-B1 NUCLEOTIDE SEQUENCES FOR USE AS TOOLS IN GENETIC ENGINEERING AND CONTROLLING TRANSLATION ISIS PHARMACEUTICALS, INC. 2002-07-16 — — US disclosed
US-6194598-B1 Aminooxy-modified oligonucleotide synthetic intermediates ISIS PHARMACEUTICALS, INC. 2001-02-27 — — US disclosed
US-6172209-B1 MOLECULAR HYBRIDIZATION, GENETIC ENGINEERING; NUCLEASE RESISTANCE ISIS PHARMACEUTICALS INC. 2001-01-09 — — US disclosed
US-6127533-A SPECIFICALLY HYBRIDIZABLE WITH A SELECTED SEQUENCE OF RNA OR DNA; DIAGNOSIS OF DISEASES ISIS PHARMACEUTICALS, INC. (US) 2000-10-03 — — US disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (2 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20030181693-A1 Oligonucleotide analogs having modified dimers RNASEL, ADAR, RNGTT PRMT6 1901/4885PDE4A 3343/4885PDE4D 2984/4885
US-20030088079-A1 AMINOOXY-MODIFIED NUCLEOSIDIC COMPOUNDS AND OLIGOMERIC COMPOUNDS PREPARED THEREFROM HNRNPM, RNASEH1, HNRNPF PRMT6 1155/4885PDE4A 3386/4885PDE4D 3662/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.

Send feedback