Spermidine

Spermidine

SCHEMBL8073115

NCCCCN.NCCCCNCCCN

nearest known ligand 1.00 ✓ in ChEMBL — recovers established targets

Full drug profile on Sugi Atlas →

Predicted protein targets (top 20)

geneUniProtsupporting neighboursconfidence
CA12 O43570 5/20 1.00
CA6 P23280 5/20 1.00
CA7 P43166 5/20 1.00
CA9 Q16790 5/20 1.00
CA14 Q9ULX7 5/20 1.00
CA5B Q9Y2D0 5/20 1.00
CA2 P00918 4/20 1.00
CA4 P22748 4/20 1.00
CA5A P35218 4/20 1.00
ALOX15 P16050 3/20 1.00
CA3 P07451 3/20 1.00
F13A1 P00488 2/20 1.00
CYP1A2 P05177 2/20 1.00
THPO P40225 2/20 1.00
CA1 P00915 2/20 1.00
CYP2C9 P11712 1/20 1.00
PKM P14618 1/20 1.00
TSHR P16473 1/20 1.00
MTOR P42345 1/20 1.00
LMNA P02545 3/20 0.93

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL3165201 1.00 CA12 (1.00) CA12CA6CA7CA9CA14
Spermidine SCHEMBL288987 1.00 CA12 (1.00) CA12CA6CA7CA9CA14
SCHEMBL3175232 1.00 CA12 (1.00) CA12CA6CA7CA9CA14
Spermine SCHEMBL431884 1.00 CA12 (1.00) CA12CA6CA7CA9CA14
Spermine SCHEMBL288605 1.00 CA12 (1.00) CA12CA6CA7CA9CA14
Spermine SCHEMBL5802297 1.00 CA12 (1.00) CA12CA6CA7CA9CA14
Spermidine SCHEMBL15618 1.00 CA12 (1.00) CA12CA6CA7CA9CA14
Spermidine SCHEMBL6253721 1.00 CA12 (1.00) CA12CA6CA7CA9CA14
SCHEMBL4861043 0.97 CA12 (0.93) CA12CA6CA7CA9CA14
Spermidine SCHEMBL573651 0.97 LMNA (1.00) CA12CA6CA7CA9CA14

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 53 patents — showing the first 20. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-20210069263-A1 BACTERIA-COMPRISING COMPOSITIONS AND METHODS OF USING THE SAME FOR TREATING AND/OR PREVENTING GASTROINTESTINAL, METABOLIC AND/OR OTHER DISEASES UNIV WAGENINGEN (NL) 2021-03-11 US claimed
EP-3242957-B1 BACTERIA-COMPRISING COMPOSITIONS AND METHODS OF USING THE SAME FOR TREATING AND/OR PREVENTING GASTROINTESTINAL, METABOLIC AND/OR OTHER DISEASES UNIV WAGENINGEN (NL) 2020-03-11 EP claimed
US-20180353552-A1 BACTERIA-COMPRISING COMPOSITIONS AND METHODS OF USING THE SAME FOR TREATING AND/OR PREVENTING GASTROINTESTINAL, METABOLIC AND/OR OTHER DISEASES WAGENINGEN UNIVERSITEIT (NL) 2018-12-13 US claimed
EP-3242957-A1 BACTERIA-COMPRISING COMPOSITIONS AND METHODS OF USING THE SAME FOR TREATING AND/OR PREVENTING GASTROINTESTINAL, METABOLIC AND/OR OTHER DISEASES Wageningen Universiteit (NL) 2017-11-15 EP claimed
WO-2016110585-A1 BACTERIA-COMPRISING COMPOSITIONS AND METHODS OF USING THE SAME FOR TREATING AND/OR PREVENTING GASTROINTESTINAL, METABOLIC AND/OR OTHER DISEASES WAGENINGEN UNIVERSITEIT (NL) 2016-07-14 WO claimed
EP-4368254-A2 MODULATION OF THE GUT MICROBIOME TO TREAT MENTAL DISORDERS OR DISEASES OF THE CENTRAL NERVOUS SYSTEM Holobiome, Inc. (US) 2024-05-15 EP disclosed
EP-4346857-A1 INSULIN-SENSITIZING AGENT AND BUTYRATE-PRODUCING BACTERIUM Caelus Pharmaceuticals B.V. (NL) 2024-04-10 EP disclosed
US-11667927-B2 Chromobacterium subtsugae genome PRO FARM GROUP, INC. (US) 2023-06-06 US disclosed
US-11414463-B2 Polypeptide and immune modulation 4D PHARMA RESEARCH LIMITED (GB) 2022-08-16 US disclosed
US-20220040242-A1 MODULATION OF THE GUT MICROBIOME TO TREAT MENTAL DISORDERS OR DISEASES OF THE CENTRAL NERVOUS SYSTEM HOLOBIOME, INC. 2022-02-10 US disclosed
US-20210388378-A1 Chromobacterium Subtsugae Genome MARRONE BIO INNOVATIONS, INC. (US) 2021-12-16 US disclosed
US-11130966-B2 Chromobacterium subtsugae genome MARRONE BIO INNOVATIONS, INC. (US) 2021-09-28 US disclosed
EP-0954596-A1 ENHANCED PRODUCTION OF TAXANES BY CELL CULTURES OF $i(TAXUS) SPECIES PHYTON, INC. (US) 1999-11-10 EP disclosed
WO-1997044476-A1 ENHANCED PRODUCTION OF TAXANES BY CELL CULTURES OF TAXUS SPECIES PHYTON, INC. (US) 1997-11-27 WO disclosed
US-5189025-A Administering amino acid mixture BOARD OF REGENETS, THE UNIVERSITY OF TEXAS SYSTEM (US) 1993-02-23 US disclosed
US-5162373-A Gut Atrophy Prevention, Ornithine, Methionine BOARD OF REGENTS, THE UNIVERSITY OF TEXAS SYSTEM (US) 1992-11-10 US disclosed
US-4988724-A Anticarcinogenic agents, antitumor agents, amino acids and citrulline and ornithine; arginine-free; antitumor and -carcinogenic agents BOARD OF REGENTS, THE UNIVERSITY OF TEXAS SYSTEM (US) 1991-01-29 US disclosed
US-4859452-A ADMINISTERING MIXTURE OF AMINO ACID AND POLYAMINE BOARD OF REGENTS, THE UNIVERSITY OF TEXAS SYSTEM (US) 1989-08-22 US disclosed
US-4550078-A ENZYMATIC OXIDATIVE DECOMPOSITION AMANO SEIYAKU KABUSHIKI KAISHA (JP) 1985-10-29 US disclosed
US-4499072-A Process for treating diseases with ODC inhibitors MERRELL DOW PHARMACEUTICALS INC. (US) 1985-02-12 US disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (1 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20220040242-A1 MODULATION OF THE GUT MICROBIOME TO TREAT MENTAL DISORDERS OR DISEASES OF THE CENTRAL NERVOUS SYSTEM GABBR1, GABBR2, GABRR2 CA12 2148/4885CA6 1925/4885CA7 3227/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.