SCHEMBL13945

SCHEMBL13945

NCCCNCc1ccc(-c2c[nH]c(NC(=O)NCc3ccc(F)cc3)nc2=O)cc1F

nearest known ligand 0.39

Predicted protein targets (top 14)

geneUniProtsupporting neighboursconfidence
CYP3A4 P08684 1/20 0.39
RAB9A P51151 4/20 0.37
POLB P06746 2/20 0.37
NPC1 O15118 1/20 0.37
MAOB P27338 1/20 0.37
ROCK2 O75116 2/20 0.35
ALDH1A1 P00352 1/20 0.35
SMN1; SMN2 Q16637 1/20 0.35
PRMT3 O60678 1/20 0.35
ROCK1 Q13464 1/20 0.35
NAMPT P43490 6/20 0.35
CHEK1 O14757 1/20 0.34
KMT2A Q03164 1/20 0.34
GAA P10253 1/20 0.34

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL13702 0.93 CA2 (0.38) CYP3A4RAB9ANPC1ROCK2PRMT3
SCHEMBL17354130 0.93 NPC1 (0.38) RAB9APOLBNPC1ROCK2SMN1; SMN2
SCHEMBL13861 0.90 MAPK1 (0.39) ROCK2ROCK1NAMPTKMT2A
SCHEMBL17354276 0.88 PTGES (0.40) ROCK2NAMPT
SCHEMBL14070 0.87 RAB9A (0.39) CYP3A4RAB9APOLBNPC1MAOB
SCHEMBL17354218 0.87 CA2 (0.38) CYP3A4RAB9APOLBNPC1ALDH1A1
SCHEMBL14850227 0.87 CNR1 (0.41) CYP3A4RAB9ANPC1ROCK2ALDH1A1
SCHEMBL14149 0.87 ROCK2 (0.40) ROCK2ROCK1
SCHEMBL14167 0.86 RET (0.34) ROCK2NAMPT
SCHEMBL14022 0.86 RAF1 (0.38) ROCK2SMN1; SMN2ROCK1

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 9 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-9845297-B2 Antimicrobial compounds and methods of making and using the same MELINTA THERAPEUTICS, INC. (US) 2017-12-19 US disclosed
US-9845297-B2 Antimicrobial compounds and methods of making and using the same MELINTA THERAPEUTICS, INC. (US) 2017-12-19 US disclosed
US-20160031828-A1 ANTIMICROBIAL COMPOUNDS AND METHODS OF MAKING AND USING THE SAME SILICON VALLEY BANK 2016-02-04 US disclosed
US-20160031828-A1 ANTIMICROBIAL COMPOUNDS AND METHODS OF MAKING AND USING THE SAME SILICON VALLEY BANK 2016-02-04 US disclosed
US-9216979-B2 Antimicrobial compounds and methods of making and using the same MELINTA THERAPEUTICS, INC. (US) 2015-12-22 US disclosed
US-9216979-B2 Antimicrobial compounds and methods of making and using the same MELINTA THERAPEUTICS, INC. (US) 2015-12-22 US disclosed
US-20130090326-A1 Antimicrobial Compounds and Methods of Making and Using the Same RIB-X PHARMACEUTICALS, INC. (US) 2013-04-11 US disclosed
US-20130090326-A1 Antimicrobial Compounds and Methods of Making and Using the Same RIB-X PHARMACEUTICALS, INC. (US) 2013-04-11 US disclosed
WO-2011047323-A2 ANTIMICROBIAL COMPOUNDS AND METHODS OF MAKING AND USING THE SAME RIB-X PHARMACEUTICALS, INC. (US) 2011-04-21 WO disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (2 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20130090326-A1 Antimicrobial Compounds and Methods of Making and Using the Same MPO, LPO, CAT CYP3A4 1470/4885RAB9A 3216/4885POLB 525/4885
US-20160031828-A1 ANTIMICROBIAL COMPOUNDS AND METHODS OF MAKING AND USING THE SAME MPO, LPO, CAT CYP3A4 1470/4885RAB9A 3216/4885POLB 525/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.