Zebularine

Zebularine

SCHEMBL12040244

O=c1ncccn1[C@@H]1O[C@H](CO)C(O)C1O

nearest known ligand 1.00 ✓ in ChEMBL — recovers established targets

Full drug profile on Sugi Atlas →

Predicted protein targets (top 20)

geneUniProtsupporting neighboursconfidence
▸ CDA P32320 2/20 1.00
▸ MAPT P10636 2/20 1.00
▸ LMNA P02545 2/20 0.61
▸ MTOR P42345 2/20 0.61
▸ THRB P10828 1/20 0.61
▸ MDM2 Q00987 1/20 0.61
▸ NCOA1 Q15788 1/20 0.61
▸ NCOA3 Q9Y6Q9 1/20 0.61
▸ ALDH1A1 P00352 2/20 0.58
▸ TP53 P04637 2/20 0.58
▸ HTT P42858 2/20 0.58
▸ BLM P54132 2/20 0.58
▸ GMNN O75496 1/20 0.58
▸ NFKB1 P19838 1/20 0.58
▸ DNMT1 P26358 1/20 0.58
▸ THPO P40225 1/20 0.58
▸ RAB9A P51151 1/20 0.58
▸ HBB P68871 1/20 0.58
▸ PMP22 Q01453 1/20 0.58
▸ SLC28A1 O00337 1/20 0.53

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
Zebularine SCHEMBL12595413 1.00 CDA (1.00) CDAMAPTLMNAMTORTHRB
Zebularine SCHEMBL13032 1.00 CDA (1.00) CDAMAPTLMNAMTORTHRB
Zebularine SCHEMBL7122633 1.00 CDA (1.00) CDAMAPTLMNAMTORTHRB
Zebularine SCHEMBL11910465 1.00 CDA (1.00) CDAMAPTLMNAMTORTHRB
Zebularine SCHEMBL2563757 1.00 CDA (1.00) CDAMAPTLMNAMTORTHRB
Zebularine SCHEMBL1649826 1.00 CDA (1.00) CDAMAPTLMNAMTORTHRB
Zebularine SCHEMBL19656926 1.00 CDA (1.00) CDAMAPTLMNAMTORTHRB
Zebularine SCHEMBL21842491 1.00 CDA (1.00) CDAMAPTLMNAMTORTHRB
Zebularine SCHEMBL21474114 1.00 CDA (1.00) CDAMAPTLMNAMTORTHRB
Zebularine SCHEMBL1444853 1.00 CDA (1.00) CDAMAPTLMNAMTORTHRB

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 23 patents — showing the first 20. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
US-20230255996-A1 ORAL FORMULATIONS OF CYTIDINE ANALOGS AND METHODS OF USE THEREOF CELGENE CORPORATION 2023-08-17 — — US disclosed
US-20230241086-A1 ORAL FORMULATIONS OF CYTIDINE ANALOGS AND METHODS OF USE THEREOF CELGENE CORPORATION 2023-08-03 — — US disclosed
US-11571436-B2 Oral formulations of cytidine analogs and methods of use thereof CELGENE CORPORATION (US) 2023-02-07 — — US disclosed
US-20210196723-A1 Modulators of DUX4 for Regulation of Muscle Function SONIC MASTER LTD (VG) 2021-07-01 — — US disclosed
US-20210100805-A1 COMBINATION THERAPY FOR TREATING MALIGNANCIES SERVIER PHARMACEUTICALS LLC 2021-04-08 — — US disclosed
US-20200405737-A1 COMBINATION THERAPY FOR TREATING MALIGNANCIES SERVIER PHARMACEUTICALS LLC 2020-12-31 — — US disclosed
US-20200208116-A1 GENERATION OF HUMAN PLURIPOTENT STEM CELL DERIVED FUNCTIONAL BETA CELLS SHOWING A GLUCOSE-DEPENDENT MITOCHONDRIAL RESPIRATION AND TWO-PHASE INSULIN SECRETION RESPONSE JANSSEN BIOTECH, INC. (US) 2020-07-02 — — US disclosed
US-10695352-B2 Combination therapy for treating malignancies CELGENE CORPORATION (US) 2020-06-30 — — US disclosed
US-20200155610-A1 MESENCHYMAL STEM CELLS WITH ENHANCED IMMUNOSUPPRESSIVE CAPABILITY JUVENESCENCE LIMITED (GB) 2020-05-21 — — US disclosed
US-10653710-B2 Combination therapy for treating malignancies AGIOS PHARMACEUTICALS, INC. (US) 2020-05-19 — — US disclosed
US-10226478-B2 Dosage regimen for sapacitabine and decitabine in combination for treating acute myeloid leukemia CYCLACEL LIMITED (GB) 2019-03-12 — — US disclosed
US-10220050-B2 Isotopologues of 5-azacytidine CELGENE CORPORATION (US) 2019-03-05 — — US disclosed
US-10028973-B2 Using DNA methyltransferase inhibitors to treat calcific aorta valve disease MAYO FOUNDATION FOR MEDICAL EDUCATION AND RESEARCH (US) 2018-07-24 — — US disclosed
US-20180153916-A1 ISOTOPOLOGUES OF 5-AZACYTIDINE CELGENE CORPORATION 2018-06-07 — — US disclosed
US-9693987-B2 Methods for treating cancers using oral formulations of cytidine analogs CELGENE CORPORATION (US) 2017-07-04 — — US disclosed
US-20170065639-A1 MESENCHYMAL STEM CELLS WITH ENHANCED IMMUNOSUPPRESSIVE CAPABILITY ESCAPE THERAPEUTICS, INC. 2017-03-09 — — US disclosed
US-20110319355-A1 METHODS FOR TREATING NON-SMALL CELL LUNG CANCER USING 5-AZACYTIDINE PHARMION LLC 2011-12-29 — — US disclosed
US-20110301199-A1 COMPOSITIONS AND METHODS FOR TREATING MYELODYSPLASTIC SYNDROME TELIK, INC. 2011-12-08 — — US disclosed
US-20110207692-A1 COMBINATIONS OF SAPACITABINE OR CNDAC WITH DNA METHYLTRANSFERASE INHIBITORS SUCH AS DECITABINE AND PROCAINE CYCLACEL LIMITED (GB) 2011-08-25 — — US disclosed
US-20090286752-A1 ORAL FORMULATIONS OF CYTIDINE ANALOGS AND METHODS OF USE THEREOF CELGENE CORPORATION 2009-11-19 — — US disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (19 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20110301199-A1 COMPOSITIONS AND METHODS FOR TREATING MYELODYSPLASTIC SYNDROME EZH2, TET2, DNMT3A CDA 602/4885MAPT 2774/4885LMNA 1189/4885
US-20210196723-A1 Modulators of DUX4 for Regulation of Muscle Function DDX21, MBNL1, MECP2 CDA 813/4885MAPT 3643/4885LMNA 1943/4885
US-10028973-B2 Using DNA methyltransferase inhibitors to treat calcific aorta valve disease DNMT1, DNMT3A, DNMT3B CDA 247/4885MAPT 2506/4885LMNA 1885/4885
US-10653710-B2 Combination therapy for treating malignancies IDH3B, IDH1, IDH3A CDA 225/4885MAPT 4666/4885LMNA 3532/4885
US-20230241086-A1 ORAL FORMULATIONS OF CYTIDINE ANALOGS AND METHODS OF USE THEREOF DCTD, CDA, NT5C2 CDA 2/4885MAPT 4320/4885LMNA 1285/4885
US-20110207692-A1 COMBINATIONS OF SAPACITABINE OR CNDAC WITH DNA METHYLTRANSFERASE INHIBITORS SUCH AS DECITABINE AND PROCAINE DNMT1, DCTD, DNMT3A CDA 13/4885MAPT 2897/4885LMNA 578/4885
US-20170065639-A1 MESENCHYMAL STEM CELLS WITH ENHANCED IMMUNOSUPPRESSIVE CAPABILITY HLA-C, HLA-B, HLA-DRB1 CDA 152/4885MAPT 4052/4885LMNA 3899/4885
US-20090286752-A1 ORAL FORMULATIONS OF CYTIDINE ANALOGS AND METHODS OF USE THEREOF DCTD, CDA, NT5C2 CDA 2/4885MAPT 4320/4885LMNA 1285/4885
US-10695352-B2 Combination therapy for treating malignancies IDH3B, IDH2, IDH3A CDA 163/4885MAPT 4288/4885LMNA 2767/4885
US-20180153916-A1 ISOTOPOLOGUES OF 5-AZACYTIDINE UNG, DCTD, DPYD CDA 14/4885MAPT 4224/4885LMNA 2638/4885
US-20200155610-A1 MESENCHYMAL STEM CELLS WITH ENHANCED IMMUNOSUPPRESSIVE CAPABILITY HLA-C, HLA-B, HLA-DRB1 CDA 152/4885MAPT 4052/4885LMNA 3899/4885
US-20230255996-A1 ORAL FORMULATIONS OF CYTIDINE ANALOGS AND METHODS OF USE THEREOF DCTD, CDA, NT5C2 CDA 2/4885MAPT 4320/4885LMNA 1285/4885
US-11571436-B2 Oral formulations of cytidine analogs and methods of use thereof DCTD, CDA, NT5C2 CDA 2/4885MAPT 4320/4885LMNA 1285/4885
US-10220050-B2 Isotopologues of 5-azacytidine DNMT1, TOP2A, TET2 CDA 86/4885MAPT 3326/4885LMNA 3478/4885
US-20110319355-A1 METHODS FOR TREATING NON-SMALL CELL LUNG CANCER USING 5-AZACYTIDINE DCTD, NSUN2, RNMT CDA 8/4885MAPT 4828/4885LMNA 2657/4885
US-20200208116-A1 GENERATION OF HUMAN PLURIPOTENT STEM CELL DERIVED FUNCTIONAL BETA CELLS SHOWING A GLUCOSE-DEPENDENT MITOCHONDRIAL RESPIRATION AND TWO-PHASE INSULIN SECRETION RESPONSE SLC2A3, SLC2A2, SLC2A1 CDA 1575/4885MAPT 4010/4885LMNA 3563/4885
US-20210100805-A1 COMBINATION THERAPY FOR TREATING MALIGNANCIES IDH3B, IDH2, IDH3A CDA 163/4885MAPT 4288/4885LMNA 2767/4885
US-10226478-B2 Dosage regimen for sapacitabine and decitabine in combination for treating acute myeloid leukemia DNMT3A, DNMT1, MCL1 CDA 28/4885MAPT 4386/4885LMNA 2753/4885
US-20200405737-A1 COMBINATION THERAPY FOR TREATING MALIGNANCIES IDH3B, IDH3A, IDH1 CDA 223/4885MAPT 4333/4885LMNA 2682/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.

Send feedback