SCHEMBL5403467

SCHEMBL5403467

COc1ccc(C(OC(C(=O)c2ccccc2)[C@H]2O[C@@H](n3cnc4c(N)ncnc43)C[C@@H]2OP(OCCC#N)N(C(C)C)C(C)C)(c2ccccc2)c2ccc(OC)cc2)cc1

nearest known ligand 0.36

Predicted protein targets (top 9)

geneUniProtsupporting neighboursconfidence
TRDMT1 O14717 1/20 0.35
NNMT P40261 2/20 0.34
CHKA P35790 1/20 0.34
CARM1 Q86X55 2/20 0.34
ADORA1 P30542 2/20 0.33
TYMP P19971 1/20 0.33
P2RX3 P56373 1/20 0.33
P2RX4 Q99571 1/20 0.33
P2RX2 Q9UBL9 1/20 0.33

Click a target to see other patent compounds predicted against it — the reverse direction, in place.

Similar compounds — the chemically nearest patent molecules

Nearest neighbours by Morgan-fingerprint cosine across the patent-compound collection, with each neighbour's top predicted target and the predicted targets it shares with this molecule.

Compoundsimilaritytop predictedshared targets
SCHEMBL6318268 0.92 CHKA (0.37) TRDMT1NNMTCHKACARM1ADORA1
SCHEMBL6230190 0.92 TRDMT1 (0.34) TRDMT1NNMTCHKACARM1ADORA1
SCHEMBL6735187 0.90 TRDMT1 (0.34) TRDMT1NNMTCHKACARM1ADORA1
SCHEMBL7914645 0.88 TRDMT1 (0.37) TRDMT1NNMTCARM1ADORA1TYMP
SCHEMBL2349739 0.87 TRDMT1 (0.35) TRDMT1NNMTCHKACARM1ADORA1
SCHEMBL6895651 0.86 AHCY (0.35) TRDMT1NNMTCARM1P2RX3P2RX4
SCHEMBL5396749 0.86 POLB (0.31)
SCHEMBL6898692 0.85 AHCY (0.35) TRDMT1NNMTCARM1
SCHEMBL15301771 0.85 TYMP (0.41) TRDMT1NNMTCARM1ADORA1TYMP
SCHEMBL7050370 0.83 NNMT (0.34) TRDMT1NNMTCARM1ADORA1TYMP

Similarity is cosine over the 2,048-bit Morgan fingerprint (≈ Tanimoto). Identical fingerprints score 1.00.

Patent provenance — the patents this molecule appears in, and who filed them

Claimed or disclosed in 17 patents. claimed = in the patent's claims; disclosed = body only.

PatentTitleAssigneePublishedPriorityFilingCountryStatus
EP-3296306-B1 BASE-PROTECTED OLIGONUCLEOTIDE AJINOMOTO KK (JP) 2022-11-09 EP disclosed
EP-3296306-A1 BASE-PROTECTED OLIGONUCLEOTIDE AJINOMOTO CO., INC. (JP) 2018-03-21 EP disclosed
EP-2816053-A1 BASE-PROTECTED OLIGONUCLEOTIDE Ajinomoto Co., Inc. (JP) 2014-12-24 EP disclosed
US-7273933-B1 Methods for synthesis of oligonucleotides ISIS PHARMACEUTICALS, INC. (US) 2007-09-25 US disclosed
US-6858722-B2 Oligomer phosphoramidite compositions and processes for synthesizing the same ISIS PHARMACEUTICALS, INC. (US) 2005-02-22 US disclosed
US-20040203036-A1 Multimer polynucleotide synthesis CHEMOGENIX GMBH (DE) 2004-10-14 US disclosed
US-20040185491-A1 Methods for synthesis of oligonucleotides ISIS PHARMACEUTICALS, INC. 2004-09-23 US disclosed
EP-0983233-B1 REAGENT USEFUL FOR SYNTHESIZING SULFURIZED OLIGONUCLEOTIDE ANALOGS ISIS PHARMACEUTICALS INC (US) 2004-05-06 EP disclosed
EP-1409505-A1 MULTIMER POLYNUCLEOTIDE SYNTHESIS Chemogenix GmbH (DE) 2004-04-21 EP disclosed
US-20030229220-A1 Oligomer phosphoramidite compositions and processes for synthesizing the same RAVIKUMAR VASULINGA T (US) 2003-12-11 US disclosed
US-6642373-B2 Phosphitylating using pyridinium salt activators; forming phosphorate or phosphorothioate intersugar linkages ISIS PHARMACEUTICALS, INC. 2003-11-04 US disclosed
US-20030191304-A1 Activators for oligonucleotide synthesis IONIS PHARMACEUTICALS, INC. 2003-10-09 US disclosed
US-6610842-B1 Removing hydroxyl protecting group from compound of given formula and treating with another compound; wide range of diagnostic and therapeutic uses ISIS PHARMACEUTICALS, INC. 2003-08-26 US disclosed
WO-2003006476-A1 MULTIMER POLYNUCLEOTIDE SYNTHESIS CHEMOGENIX GMBH (DE) 2003-01-23 WO disclosed
EP-1175432-A4 PROCESSES FOR THE SYNTHESIS OF OLIGOMERS USING PHOSPHORAMIDITE COMPOSITIONS ISIS PHARMACEUTICALS INC (US) 2002-09-25 EP disclosed
EP-1175432-A1 PROCESSES FOR THE SYNTHESIS OF OLIGOMERS USING PHUSPHORAMIDITE COMPOSITIONS ISIS PHARMACEUTICALS, INC. (US) 2002-01-30 EP disclosed
WO-2000068241-A1 PROCESSES FOR THE SYNTHESIS OF OLIGOMERS USING PHUSPHORAMIDITE COMPOSITIONS ISIS PHARMACEUTICALS, INC. (US) 2000-11-16 WO disclosed

Patent text — is the patent's own abstract consistent with the prediction?

For each of this compound's patents that has machine-readable text (4 of them — usually the abstract, not the full specification), we ask MedCPT which protein the text reads most about, and where the chemistry-predicted target lands among 4885 human targets. A high rank means the patent's own wording is consistent with the prediction — a weak, independent signal, not proof of activity.

PatentTitleText reads most aboutPredicted target · text-rank
US-20040185491-A1 Methods for synthesis of oligonucleotides RNGTT, POLL, TYMP TRDMT1 164/4885NNMT 1798/4885CHKA 2245/4885
US-20030229220-A1 Oligomer phosphoramidite compositions and processes for synthesizing the same PHOSPHO1, OSGEP, DTYMK TRDMT1 132/4885NNMT 633/4885CHKA 2602/4885
US-20040203036-A1 Multimer polynucleotide synthesis NT5C3B, PCNA, POLL TRDMT1 303/4885NNMT 425/4885CHKA 1713/4885
US-20030191304-A1 Activators for oligonucleotide synthesis ITPA, NUDT1, TYMP TRDMT1 56/4885NNMT 188/4885CHKA 1498/4885

“Text reads most about” is the patent abstract's nearest protein in MedCPT space (background-debiased). Only ~1.4% of patents have machine-readable text, so most compounds won't have this panel.